Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.09■□□□□ 0.49
LCN1P31025 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.09■□□□□ 0.49
LCN1P31025 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.09■□□□□ 0.49
LCN1P31025 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LCN1P31025 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LCN1P31025 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 AP006587.1-201ENST00000534129 1502 ntBASIC18.08■□□□□ 0.49
LCN1P31025 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.08■□□□□ 0.49
LCN1P31025 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.08■□□□□ 0.49
LCN1P31025 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LCN1P31025 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.08■□□□□ 0.48
LCN1P31025 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.08■□□□□ 0.48
LCN1P31025 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.08■□□□□ 0.48
LCN1P31025 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCN1P31025 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.08■□□□□ 0.48
LCN1P31025 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 AC124283.5-201ENST00000624661 1809 ntBASIC18.07■□□□□ 0.48
LCN1P31025 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
LCN1P31025 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LCN1P31025 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.07■□□□□ 0.48
LCN1P31025 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LCN1P31025 CD99P1-205ENST00000527459 561 ntBASIC18.07■□□□□ 0.48
LCN1P31025 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.07■□□□□ 0.48
LCN1P31025 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.07■□□□□ 0.48
LCN1P31025 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.07■□□□□ 0.48
LCN1P31025 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.07■□□□□ 0.48
LCN1P31025 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.07■□□□□ 0.48
LCN1P31025 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LCN1P31025 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.07■□□□□ 0.48
LCN1P31025 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCN1P31025 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LCN1P31025 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.06■□□□□ 0.48
LCN1P31025 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.06■□□□□ 0.48
LCN1P31025 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.06■□□□□ 0.48
LCN1P31025 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.06■□□□□ 0.48
LCN1P31025 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.06■□□□□ 0.48
LCN1P31025 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.06■□□□□ 0.48
LCN1P31025 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LCN1P31025 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.06■□□□□ 0.48
LCN1P31025 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCN1P31025 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCN1P31025 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCN1P31025 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCN1P31025 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms