Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP8P22894 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.58■□□□□ 0.89
MMP8P22894 AC233263.1-201ENST00000578059 224 ntBASIC20.58■□□□□ 0.89
MMP8P22894 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP8P22894 AC069544.1-201ENST00000609399 999 ntBASIC20.58■□□□□ 0.89
MMP8P22894 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.58■□□□□ 0.89
MMP8P22894 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
MMP8P22894 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP8P22894 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.58■□□□□ 0.88
MMP8P22894 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.58■□□□□ 0.88
MMP8P22894 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MMP8P22894 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MMP8P22894 KRT17P3-201ENST00000420566 1262 ntBASIC20.57■□□□□ 0.88
MMP8P22894 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP8P22894 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP8P22894 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP8P22894 MTDHP1-201ENST00000605323 784 ntBASIC20.57■□□□□ 0.88
MMP8P22894 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP8P22894 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP8P22894 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP8P22894 ESRRAP1-201ENST00000400596 1257 ntBASIC20.56■□□□□ 0.88
MMP8P22894 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
MMP8P22894 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP8P22894 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP8P22894 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
MMP8P22894 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MMP8P22894 ZNF815P-204ENST00000434898 1737 ntBASIC20.56■□□□□ 0.88
MMP8P22894 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MMP8P22894 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MMP8P22894 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MMP8P22894 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
MMP8P22894 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.55■□□□□ 0.88
MMP8P22894 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.55■□□□□ 0.88
MMP8P22894 PRKY-204ENST00000533551 1019 ntBASIC20.55■□□□□ 0.88
MMP8P22894 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.55■□□□□ 0.88
MMP8P22894 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.55■□□□□ 0.88
MMP8P22894 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.55■□□□□ 0.88
MMP8P22894 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.55■□□□□ 0.88
MMP8P22894 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.55■□□□□ 0.88
MMP8P22894 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.55■□□□□ 0.88
MMP8P22894 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP8P22894 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
MMP8P22894 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP8P22894 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MMP8P22894 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms