Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CCL1P22362 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CCL1P22362 SLC29A4P1-201ENST00000398760 971 ntBASIC16.83■□□□□ 0.28
CCL1P22362 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL1P22362 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCL1P22362 NCF1B-203ENST00000435988 1254 ntBASIC16.83■□□□□ 0.28
CCL1P22362 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.83■□□□□ 0.28
CCL1P22362 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.83■□□□□ 0.28
CCL1P22362 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.83■□□□□ 0.28
CCL1P22362 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.83■□□□□ 0.28
CCL1P22362 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL1P22362 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL1P22362 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 AL121906.2-201ENST00000621597 723 ntBASIC16.83■□□□□ 0.28
CCL1P22362 AC093503.3-201ENST00000624917 2352 ntBASIC16.83■□□□□ 0.28
CCL1P22362 TEX21P-204ENST00000641479 1693 ntBASIC16.83■□□□□ 0.28
CCL1P22362 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL1P22362 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.82■□□□□ 0.28
CCL1P22362 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL1P22362 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL1P22362 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.82■□□□□ 0.28
CCL1P22362 YBX1P10-201ENST00000444752 975 ntBASIC16.82■□□□□ 0.28
CCL1P22362 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL1P22362 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.82■□□□□ 0.28
CCL1P22362 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.82■□□□□ 0.28
CCL1P22362 MIR4758-201ENST00000577688 71 ntBASIC16.82■□□□□ 0.28
CCL1P22362 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.82■□□□□ 0.28
CCL1P22362 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCL1P22362 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCL1P22362 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCL1P22362 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL1P22362 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL1P22362 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL1P22362 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL1P22362 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 AL161938.1-201ENST00000569833 2180 ntBASIC16.81■□□□□ 0.28
CCL1P22362 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.81■□□□□ 0.28
CCL1P22362 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.81■□□□□ 0.28
CCL1P22362 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL1P22362 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL1P22362 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL1P22362 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL1P22362 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 AC092368.3-202ENST00000574180 1591 ntBASIC16.81■□□□□ 0.28
CCL1P22362 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL1P22362 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL1P22362 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCL1P22362 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL1P22362 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.8■□□□□ 0.28
CCL1P22362 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms