Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 KRT8P8-201ENST00000434750 1448 ntBASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 AL031432.5-201ENST00000641059 760 ntBASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.97■■□□□ 1.75
CSB-PGBD3P0DP91 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 HOMER2P1-201ENST00000455653 964 ntBASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 AL512604.3-201ENST00000569583 964 ntBASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSB-PGBD3P0DP91 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
CSB-PGBD3P0DP91 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
CSB-PGBD3P0DP91 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSB-PGBD3P0DP91 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 TPM4P1-201ENST00000436100 807 ntBASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 AL671277.2-201ENST00000458060 996 ntBASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 AL441883.1-201ENST00000566170 1045 ntBASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 AL160286.2-201ENST00000567150 934 ntBASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CSB-PGBD3P0DP91 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 PKD1P6-201ENST00000343738 4769 ntBASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CSB-PGBD3P0DP91 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSB-PGBD3P0DP91 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.91■■□□□ 1.74
CSB-PGBD3P0DP91 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms