Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SP9P0CG40 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SP9P0CG40 KRT8P8-201ENST00000434750 1448 ntBASIC19.34■□□□□ 0.69
SP9P0CG40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.33■□□□□ 0.69
SP9P0CG40 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SP9P0CG40 AC016734.2-201ENST00000624325 1377 ntBASIC19.33■□□□□ 0.69
SP9P0CG40 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SP9P0CG40 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SP9P0CG40 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.33■□□□□ 0.68
SP9P0CG40 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
SP9P0CG40 NUS1P1-201ENST00000446295 882 ntBASIC19.33■□□□□ 0.68
SP9P0CG40 EMBP1-201ENST00000458200 901 ntBASIC19.33■□□□□ 0.68
SP9P0CG40 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.33■□□□□ 0.68
SP9P0CG40 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.33■□□□□ 0.68
SP9P0CG40 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.33■□□□□ 0.68
SP9P0CG40 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 AL031008.1-201ENST00000619963 541 ntBASIC19.33■□□□□ 0.68
SP9P0CG40 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.33■□□□□ 0.68
SP9P0CG40 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.33■□□□□ 0.68
SP9P0CG40 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SP9P0CG40 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SP9P0CG40 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.32■□□□□ 0.68
SP9P0CG40 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SP9P0CG40 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.32■□□□□ 0.68
SP9P0CG40 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SP9P0CG40 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.32■□□□□ 0.68
SP9P0CG40 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.32■□□□□ 0.68
SP9P0CG40 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.32■□□□□ 0.68
SP9P0CG40 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 AC104692.2-201ENST00000603054 253 ntBASIC19.32■□□□□ 0.68
SP9P0CG40 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.32■□□□□ 0.68
SP9P0CG40 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SP9P0CG40 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SP9P0CG40 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.32■□□□□ 0.68
SP9P0CG40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SP9P0CG40 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
SP9P0CG40 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SP9P0CG40 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SP9P0CG40 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SP9P0CG40 AP002383.4-201ENST00000442518 975 ntBASIC19.31■□□□□ 0.68
SP9P0CG40 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.31■□□□□ 0.68
SP9P0CG40 AL160237.2-201ENST00000556165 472 ntBASIC19.31■□□□□ 0.68
SP9P0CG40 AC011498.5-201ENST00000592027 486 ntBASIC19.31■□□□□ 0.68
SP9P0CG40 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.31■□□□□ 0.68
SP9P0CG40 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.31■□□□□ 0.68
SP9P0CG40 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.31■□□□□ 0.68
SP9P0CG40 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.31■□□□□ 0.68
SP9P0CG40 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.31■□□□□ 0.68
SP9P0CG40 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SP9P0CG40 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.3■□□□□ 0.68
SP9P0CG40 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 AL049796.1-201ENST00000565336 1766 ntBASIC19.3■□□□□ 0.68
SP9P0CG40 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SP9P0CG40 AC092597.1-201ENST00000487352 616 ntBASIC19.3■□□□□ 0.68
SP9P0CG40 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.3■□□□□ 0.68
SP9P0CG40 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.3■□□□□ 0.68
SP9P0CG40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.3■□□□□ 0.68
SP9P0CG40 BX119927.1-201ENST00000636596 1552 ntBASIC19.3■□□□□ 0.68
SP9P0CG40 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SP9P0CG40 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SP9P0CG40 AC244015.2-201ENST00000616358 1861 ntBASIC19.29■□□□□ 0.68
SP9P0CG40 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SP9P0CG40 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.29■□□□□ 0.68
SP9P0CG40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SP9P0CG40 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.29■□□□□ 0.68
SP9P0CG40 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms