Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
MMP3P08254 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP3P08254 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
MMP3P08254 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP3P08254 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP3P08254 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP3P08254 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP3P08254 AL512408.1-201ENST00000569378 2000 ntBASIC21.69■■□□□ 1.06
MMP3P08254 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP3P08254 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP3P08254 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.69■■□□□ 1.06
MMP3P08254 AK4P3-201ENST00000418260 669 ntBASIC21.69■■□□□ 1.06
MMP3P08254 AC007663.1-201ENST00000438948 1240 ntBASIC21.69■■□□□ 1.06
MMP3P08254 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP3P08254 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP3P08254 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
MMP3P08254 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP3P08254 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MMP3P08254 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP3P08254 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP3P08254 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP3P08254 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP3P08254 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 AC117947.1-201ENST00000427448 529 ntBASIC21.68■■□□□ 1.06
MMP3P08254 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.68■■□□□ 1.06
MMP3P08254 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 AL138966.2-201ENST00000621997 464 ntBASIC21.68■■□□□ 1.06
MMP3P08254 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
MMP3P08254 AC092338.2-201ENST00000568827 1415 ntBASIC21.68■■□□□ 1.06
MMP3P08254 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP3P08254 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP3P08254 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP3P08254 AL691432.2-201ENST00000607222 2038 ntBASIC21.67■■□□□ 1.06
MMP3P08254 AP005212.1-201ENST00000581547 1997 ntBASIC21.67■■□□□ 1.06
MMP3P08254 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP3P08254 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
MMP3P08254 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
MMP3P08254 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.67■■□□□ 1.06
MMP3P08254 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP3P08254 AL023803.3-201ENST00000615559 522 ntBASIC21.67■■□□□ 1.06
MMP3P08254 AC010653.2-201ENST00000623505 997 ntBASIC21.67■■□□□ 1.06
MMP3P08254 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP3P08254 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MMP3P08254 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP3P08254 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MMP3P08254 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP3P08254 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP3P08254 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 AC022616.7-201ENST00000525383 220 ntBASIC21.66■■□□□ 1.06
MMP3P08254 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP3P08254 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
MMP3P08254 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
MMP3P08254 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP3P08254 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MMP3P08254 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.65■■□□□ 1.06
MMP3P08254 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.65■■□□□ 1.06
MMP3P08254 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 AC063952.2-201ENST00000498792 1227 ntBASIC21.65■■□□□ 1.06
MMP3P08254 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.65■■□□□ 1.06
MMP3P08254 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.65■■□□□ 1.06
MMP3P08254 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP3P08254 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
MMP3P08254 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.65■■□□□ 1.06
MMP3P08254 KRT8P41-201ENST00000533985 1514 ntBASIC21.65■■□□□ 1.06
MMP3P08254 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.64■■□□□ 1.06
MMP3P08254 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MMP3P08254 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms