Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.3■□□□□ 0.84
RHOP08100 AC063952.2-201ENST00000498792 1227 ntBASIC20.3■□□□□ 0.84
RHOP08100 AC022616.7-201ENST00000525383 220 ntBASIC20.3■□□□□ 0.84
RHOP08100 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RHOP08100 AL160286.2-201ENST00000567150 934 ntBASIC20.3■□□□□ 0.84
RHOP08100 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOP08100 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.3■□□□□ 0.84
RHOP08100 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.3■□□□□ 0.84
RHOP08100 AL138966.2-201ENST00000621997 464 ntBASIC20.3■□□□□ 0.84
RHOP08100 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RHOP08100 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RHOP08100 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOP08100 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RHOP08100 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOP08100 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOP08100 AC010653.2-201ENST00000623505 997 ntBASIC20.29■□□□□ 0.84
RHOP08100 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RHOP08100 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
RHOP08100 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
RHOP08100 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RHOP08100 AC020907.5-201ENST00000624372 1936 ntBASIC20.29■□□□□ 0.84
RHOP08100 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.28■□□□□ 0.84
RHOP08100 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.28■□□□□ 0.84
RHOP08100 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.28■□□□□ 0.84
RHOP08100 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.28■□□□□ 0.84
RHOP08100 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.28■□□□□ 0.84
RHOP08100 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.28■□□□□ 0.84
RHOP08100 LINC01238-205ENST00000567549 1107 ntBASIC20.28■□□□□ 0.84
RHOP08100 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.28■□□□□ 0.84
RHOP08100 AC139887.4-201ENST00000607877 719 ntBASIC20.28■□□□□ 0.84
RHOP08100 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RHOP08100 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
RHOP08100 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 FEM1AP1-201ENST00000431297 1995 ntBASIC20.28■□□□□ 0.84
RHOP08100 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RHOP08100 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 AC092338.2-201ENST00000568827 1415 ntBASIC20.27■□□□□ 0.84
RHOP08100 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.27■□□□□ 0.84
RHOP08100 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RHOP08100 LINC01465-201ENST00000408887 1940 ntBASIC20.27■□□□□ 0.84
RHOP08100 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RHOP08100 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.27■□□□□ 0.84
RHOP08100 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RHOP08100 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.27■□□□□ 0.84
RHOP08100 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.27■□□□□ 0.84
RHOP08100 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.27■□□□□ 0.84
RHOP08100 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.27■□□□□ 0.84
RHOP08100 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
RHOP08100 AL023803.3-201ENST00000615559 522 ntBASIC20.27■□□□□ 0.84
RHOP08100 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
RHOP08100 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHOP08100 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RHOP08100 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHOP08100 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RHOP08100 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHOP08100 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHOP08100 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.26■□□□□ 0.83
RHOP08100 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
RHOP08100 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHOP08100 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RHOP08100 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RHOP08100 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RHOP08100 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RHOP08100 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.25■□□□□ 0.83
RHOP08100 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 RNF152P1-201ENST00000397754 604 ntBASIC20.25■□□□□ 0.83
RHOP08100 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.25■□□□□ 0.83
RHOP08100 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RHOP08100 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
RHOP08100 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.25■□□□□ 0.83
RHOP08100 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RHOP08100 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms