Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT6AP02538 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.92■□□□□ 0.62
KRT6AP02538 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT6AP02538 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.92■□□□□ 0.62
KRT6AP02538 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.92■□□□□ 0.62
KRT6AP02538 AC091874.3-201ENST00000512672 1195 ntBASIC18.92■□□□□ 0.62
KRT6AP02538 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.92■□□□□ 0.62
KRT6AP02538 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT6AP02538 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT6AP02538 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
KRT6AP02538 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT6AP02538 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT6AP02538 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT6AP02538 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT6AP02538 TFP1-202ENST00000475455 1573 ntBASIC18.91■□□□□ 0.62
KRT6AP02538 AC087289.5-201ENST00000586076 3175 ntBASIC18.91■□□□□ 0.62
KRT6AP02538 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 MIR4758-201ENST00000577688 71 ntBASIC18.91■□□□□ 0.62
KRT6AP02538 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT6AP02538 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT6AP02538 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT6AP02538 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
KRT6AP02538 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT6AP02538 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT6AP02538 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT6AP02538 NCF1B-203ENST00000435988 1254 ntBASIC18.9■□□□□ 0.62
KRT6AP02538 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.9■□□□□ 0.62
KRT6AP02538 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT6AP02538 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT6AP02538 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT6AP02538 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT6AP02538 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
KRT6AP02538 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT6AP02538 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6AP02538 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT6AP02538 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT6AP02538 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 TSPY6P-201ENST00000448518 926 ntBASIC18.89■□□□□ 0.61
KRT6AP02538 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT6AP02538 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6AP02538 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.89■□□□□ 0.61
KRT6AP02538 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6AP02538 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KRT6AP02538 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
KRT6AP02538 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT6AP02538 AL032819.2-201ENST00000624543 2162 ntBASIC18.89■□□□□ 0.61
KRT6AP02538 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
KRT6AP02538 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms