Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DRAP01903 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DRAP01903 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DRAP01903 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 AC110285.5-201ENST00000611501 352 ntBASIC21.04■□□□□ 0.96
HLA-DRAP01903 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DRAP01903 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DRAP01903 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DRAP01903 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
HLA-DRAP01903 KRT8P8-201ENST00000434750 1448 ntBASIC21.04■□□□□ 0.96
HLA-DRAP01903 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 AC098590.1-201ENST00000468126 897 ntBASIC21.03■□□□□ 0.96
HLA-DRAP01903 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 AL359736.2-201ENST00000621992 437 ntBASIC21.03■□□□□ 0.96
HLA-DRAP01903 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DRAP01903 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HLA-DRAP01903 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.02■□□□□ 0.96
HLA-DRAP01903 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DRAP01903 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HLA-DRAP01903 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HLA-DRAP01903 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.02■□□□□ 0.96
HLA-DRAP01903 AC004264.1-201ENST00000608354 794 ntBASIC21.02■□□□□ 0.96
HLA-DRAP01903 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DRAP01903 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.02■□□□□ 0.95
HLA-DRAP01903 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.02■□□□□ 0.95
HLA-DRAP01903 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HLA-DRAP01903 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
HLA-DRAP01903 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DRAP01903 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 KRT16P5-201ENST00000455284 522 ntBASIC21■□□□□ 0.95
HLA-DRAP01903 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21■□□□□ 0.95
HLA-DRAP01903 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HLA-DRAP01903 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms