Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD4P01730 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CD4P01730 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD4P01730 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CD4P01730 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CD4P01730 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.64■■□□□ 1.05
CD4P01730 AC009947.2-201ENST00000444014 672 ntBASIC21.64■■□□□ 1.05
CD4P01730 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 COX11P1-201ENST00000489116 835 ntBASIC21.64■■□□□ 1.05
CD4P01730 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.64■■□□□ 1.05
CD4P01730 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.64■■□□□ 1.05
CD4P01730 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD4P01730 AC092338.2-201ENST00000568827 1415 ntBASIC21.63■■□□□ 1.05
CD4P01730 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CD4P01730 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.63■■□□□ 1.05
CD4P01730 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.63■■□□□ 1.05
CD4P01730 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 FAM207BP-201ENST00000447172 505 ntBASIC21.63■■□□□ 1.05
CD4P01730 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CD4P01730 KRT18P56-201ENST00000507275 550 ntBASIC21.63■■□□□ 1.05
CD4P01730 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.63■■□□□ 1.05
CD4P01730 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.63■■□□□ 1.05
CD4P01730 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.63■■□□□ 1.05
CD4P01730 AL137060.1-201ENST00000618151 2648 ntBASIC21.63■■□□□ 1.05
CD4P01730 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD4P01730 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.63■■□□□ 1.05
CD4P01730 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.62■■□□□ 1.05
CD4P01730 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.62■■□□□ 1.05
CD4P01730 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.62■■□□□ 1.05
CD4P01730 KRT126P-201ENST00000549467 1181 ntBASIC21.62■■□□□ 1.05
CD4P01730 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.62■■□□□ 1.05
CD4P01730 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.62■■□□□ 1.05
CD4P01730 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.62■■□□□ 1.05
CD4P01730 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.62■■□□□ 1.05
CD4P01730 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD4P01730 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CD4P01730 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.61■■□□□ 1.05
CD4P01730 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CD4P01730 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.61■■□□□ 1.05
CD4P01730 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD4P01730 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD4P01730 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CD4P01730 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.61■■□□□ 1.05
CD4P01730 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.61■■□□□ 1.05
CD4P01730 FAM86EP-206ENST00000510506 987 ntBASIC21.61■■□□□ 1.05
CD4P01730 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.61■■□□□ 1.05
CD4P01730 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.61■■□□□ 1.05
CD4P01730 AL023803.3-201ENST00000615559 522 ntBASIC21.61■■□□□ 1.05
CD4P01730 AC011558.1-201ENST00000623459 338 ntBASIC21.61■■□□□ 1.05
CD4P01730 AC141257.4-201ENST00000634557 245 ntBASIC21.61■■□□□ 1.05
CD4P01730 AC136944.6-201ENST00000634818 245 ntBASIC21.61■■□□□ 1.05
CD4P01730 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.61■■□□□ 1.05
CD4P01730 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD4P01730 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.61■■□□□ 1.05
CD4P01730 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD4P01730 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.61■■□□□ 1.05
CD4P01730 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.61■■□□□ 1.05
CD4P01730 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.61■■□□□ 1.05
CD4P01730 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.6■■□□□ 1.05
CD4P01730 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.6■■□□□ 1.05
CD4P01730 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CD4P01730 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CD4P01730 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CD4P01730 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.6■■□□□ 1.05
CD4P01730 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.6■■□□□ 1.05
CD4P01730 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
CD4P01730 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.6■■□□□ 1.05
CD4P01730 AL121894.2-201ENST00000602977 491 ntBASIC21.6■■□□□ 1.05
CD4P01730 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.6■■□□□ 1.05
CD4P01730 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms