Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.58■□□□□ 0.89
BEST1O76090 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.58■□□□□ 0.89
BEST1O76090 CR392000.1-201ENST00000624770 1228 ntBASIC20.58■□□□□ 0.89
BEST1O76090 HLA-A-209ENST00000638375 975 ntBASIC20.58■□□□□ 0.89
BEST1O76090 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BEST1O76090 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.58■□□□□ 0.88
BEST1O76090 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST1O76090 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BEST1O76090 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST1O76090 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.58■□□□□ 0.88
BEST1O76090 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BEST1O76090 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.57■□□□□ 0.88
BEST1O76090 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BEST1O76090 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.57■□□□□ 0.88
BEST1O76090 TSPY15P-201ENST00000457163 923 ntBASIC20.57■□□□□ 0.88
BEST1O76090 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.57■□□□□ 0.88
BEST1O76090 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST1O76090 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST1O76090 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BEST1O76090 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.56■□□□□ 0.88
BEST1O76090 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 KSR1P1-201ENST00000446298 240 ntBASIC20.56■□□□□ 0.88
BEST1O76090 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.56■□□□□ 0.88
BEST1O76090 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.56■□□□□ 0.88
BEST1O76090 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.56■□□□□ 0.88
BEST1O76090 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.56■□□□□ 0.88
BEST1O76090 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BEST1O76090 LINC01465-201ENST00000408887 1940 ntBASIC20.56■□□□□ 0.88
BEST1O76090 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.56■□□□□ 0.88
BEST1O76090 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BEST1O76090 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST1O76090 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BEST1O76090 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST1O76090 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.55■□□□□ 0.88
BEST1O76090 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST1O76090 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.55■□□□□ 0.88
BEST1O76090 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.55■□□□□ 0.88
BEST1O76090 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BEST1O76090 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.55■□□□□ 0.88
BEST1O76090 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST1O76090 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BEST1O76090 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
BEST1O76090 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.54■□□□□ 0.88
BEST1O76090 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BEST1O76090 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BEST1O76090 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
BEST1O76090 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.54■□□□□ 0.88
BEST1O76090 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 AC026471.5-201ENST00000615068 467 ntBASIC20.54■□□□□ 0.88
BEST1O76090 AL445675.2-201ENST00000620291 557 ntBASIC20.54■□□□□ 0.88
BEST1O76090 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BEST1O76090 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
BEST1O76090 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
BEST1O76090 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BEST1O76090 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BEST1O76090 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.54■□□□□ 0.88
BEST1O76090 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BEST1O76090 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 KRT16P1-201ENST00000399124 1418 ntBASIC20.53■□□□□ 0.88
BEST1O76090 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BEST1O76090 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms