Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP200O75643 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP200O75643 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP200O75643 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.75■□□□□ 0.59
SNRNP200O75643 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP200O75643 KSR1P1-201ENST00000446298 240 ntBASIC18.74■□□□□ 0.59
SNRNP200O75643 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.74■□□□□ 0.59
SNRNP200O75643 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP200O75643 AC116562.2-201ENST00000507042 360 ntBASIC18.74■□□□□ 0.59
SNRNP200O75643 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRNP200O75643 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.74■□□□□ 0.59
SNRNP200O75643 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.74■□□□□ 0.59
SNRNP200O75643 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
SNRNP200O75643 KRT8P9-201ENST00000558927 1449 ntBASIC18.74■□□□□ 0.59
SNRNP200O75643 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP200O75643 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNRNP200O75643 AL390955.1-201ENST00000428694 934 ntBASIC18.74■□□□□ 0.59
SNRNP200O75643 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP200O75643 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP200O75643 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP200O75643 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNRNP200O75643 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRNP200O75643 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRNP200O75643 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.73■□□□□ 0.59
SNRNP200O75643 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNRNP200O75643 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
SNRNP200O75643 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNRNP200O75643 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNRNP200O75643 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRNP200O75643 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP200O75643 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNRNP200O75643 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.72■□□□□ 0.59
SNRNP200O75643 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.72■□□□□ 0.59
SNRNP200O75643 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.72■□□□□ 0.59
SNRNP200O75643 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.72■□□□□ 0.59
SNRNP200O75643 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SNRNP200O75643 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNRNP200O75643 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP200O75643 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.72■□□□□ 0.59
SNRNP200O75643 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.71■□□□□ 0.59
SNRNP200O75643 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SNRNP200O75643 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.71■□□□□ 0.59
SNRNP200O75643 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.71■□□□□ 0.59
SNRNP200O75643 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.71■□□□□ 0.59
SNRNP200O75643 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 LINC01465-201ENST00000408887 1940 ntBASIC18.71■□□□□ 0.59
SNRNP200O75643 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.71■□□□□ 0.59
SNRNP200O75643 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 AC026271.3-201ENST00000571884 352 ntBASIC18.71■□□□□ 0.59
SNRNP200O75643 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.71■□□□□ 0.59
SNRNP200O75643 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.71■□□□□ 0.59
SNRNP200O75643 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.71■□□□□ 0.59
SNRNP200O75643 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNRNP200O75643 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNRNP200O75643 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNRNP200O75643 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNRNP200O75643 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP200O75643 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms