Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GDF9O60383 AC116351.2-201ENST00000606540 1585 ntBASIC19.1■□□□□ 0.65
GDF9O60383 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 AC004870.1-201ENST00000315132 882 ntBASIC19.1■□□□□ 0.65
GDF9O60383 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 UNC93B7-201ENST00000509439 705 ntBASIC19.1■□□□□ 0.65
GDF9O60383 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.1■□□□□ 0.65
GDF9O60383 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.1■□□□□ 0.65
GDF9O60383 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GDF9O60383 HYMAI.1-201ENST00000620949 238 ntBASIC19.1■□□□□ 0.65
GDF9O60383 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GDF9O60383 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.1■□□□□ 0.65
GDF9O60383 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.1■□□□□ 0.65
GDF9O60383 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GDF9O60383 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.09■□□□□ 0.65
GDF9O60383 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.09■□□□□ 0.65
GDF9O60383 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.09■□□□□ 0.65
GDF9O60383 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.09■□□□□ 0.65
GDF9O60383 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.09■□□□□ 0.65
GDF9O60383 KRT17P6-201ENST00000453795 1220 ntBASIC19.09■□□□□ 0.65
GDF9O60383 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.09■□□□□ 0.65
GDF9O60383 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.09■□□□□ 0.65
GDF9O60383 CKBP1-201ENST00000565489 1086 ntBASIC19.09■□□□□ 0.65
GDF9O60383 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.09■□□□□ 0.65
GDF9O60383 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.09■□□□□ 0.65
GDF9O60383 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 PLK5-205ENST00000642079 1969 ntBASIC19.09■□□□□ 0.65
GDF9O60383 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
GDF9O60383 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
GDF9O60383 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
GDF9O60383 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GDF9O60383 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDF9O60383 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
GDF9O60383 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDF9O60383 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDF9O60383 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
GDF9O60383 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.08■□□□□ 0.65
GDF9O60383 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
GDF9O60383 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDF9O60383 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.08■□□□□ 0.64
GDF9O60383 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.08■□□□□ 0.64
GDF9O60383 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GDF9O60383 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.08■□□□□ 0.64
GDF9O60383 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.08■□□□□ 0.64
GDF9O60383 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.08■□□□□ 0.64
GDF9O60383 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
GDF9O60383 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.08■□□□□ 0.64
GDF9O60383 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.08■□□□□ 0.64
GDF9O60383 LINC01311-201ENST00000565162 1445 ntBASIC19.08■□□□□ 0.64
GDF9O60383 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDF9O60383 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
GDF9O60383 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
GDF9O60383 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GDF9O60383 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
GDF9O60383 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GDF9O60383 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.07■□□□□ 0.64
GDF9O60383 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.07■□□□□ 0.64
GDF9O60383 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.07■□□□□ 0.64
GDF9O60383 AC111152.3-201ENST00000569699 673 ntBASIC19.07■□□□□ 0.64
GDF9O60383 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
GDF9O60383 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GDF9O60383 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms