Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.32■■□□□ 1.48
SRGAP3O43295 RPS2P4-201ENST00000476944 856 ntBASIC24.32■■□□□ 1.48
SRGAP3O43295 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.32■■□□□ 1.48
SRGAP3O43295 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.32■■□□□ 1.48
SRGAP3O43295 AF186192.3-201ENST00000583427 947 ntBASIC24.32■■□□□ 1.48
SRGAP3O43295 AC233702.5-201ENST00000584107 538 ntBASIC24.32■■□□□ 1.48
SRGAP3O43295 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.32■■□□□ 1.48
SRGAP3O43295 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.32■■□□□ 1.48
SRGAP3O43295 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SRGAP3O43295 KRT8P8-201ENST00000434750 1448 ntBASIC24.32■■□□□ 1.48
SRGAP3O43295 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRGAP3O43295 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.32■■□□□ 1.48
SRGAP3O43295 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.32■■□□□ 1.48
SRGAP3O43295 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.32■■□□□ 1.48
SRGAP3O43295 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRGAP3O43295 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SRGAP3O43295 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.32■■□□□ 1.48
SRGAP3O43295 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRGAP3O43295 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.31■■□□□ 1.48
SRGAP3O43295 AC012618.2-201ENST00000428058 849 ntBASIC24.31■■□□□ 1.48
SRGAP3O43295 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.31■■□□□ 1.48
SRGAP3O43295 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.31■■□□□ 1.48
SRGAP3O43295 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.31■■□□□ 1.48
SRGAP3O43295 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.31■■□□□ 1.48
SRGAP3O43295 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.31■■□□□ 1.48
SRGAP3O43295 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.31■■□□□ 1.48
SRGAP3O43295 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.31■■□□□ 1.48
SRGAP3O43295 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SRGAP3O43295 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.3■■□□□ 1.48
SRGAP3O43295 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.3■■□□□ 1.48
SRGAP3O43295 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SRGAP3O43295 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 AL135905.2-201ENST00000584934 1404 ntBASIC24.3■■□□□ 1.48
SRGAP3O43295 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.3■■□□□ 1.48
SRGAP3O43295 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SRGAP3O43295 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.3■■□□□ 1.48
SRGAP3O43295 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.3■■□□□ 1.48
SRGAP3O43295 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SRGAP3O43295 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SRGAP3O43295 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.3■■□□□ 1.48
SRGAP3O43295 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.3■■□□□ 1.48
SRGAP3O43295 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.29■■□□□ 1.48
SRGAP3O43295 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.29■■□□□ 1.48
SRGAP3O43295 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
SRGAP3O43295 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SRGAP3O43295 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.29■■□□□ 1.48
SRGAP3O43295 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SRGAP3O43295 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SRGAP3O43295 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRGAP3O43295 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.29■■□□□ 1.48
SRGAP3O43295 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.29■■□□□ 1.48
SRGAP3O43295 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.28■■□□□ 1.48
SRGAP3O43295 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SRGAP3O43295 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.28■■□□□ 1.48
SRGAP3O43295 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SRGAP3O43295 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.28■■□□□ 1.48
SRGAP3O43295 MIR718-201ENST00000390190 70 ntBASIC24.28■■□□□ 1.48
SRGAP3O43295 AL353807.1-201ENST00000427475 662 ntBASIC24.28■■□□□ 1.48
SRGAP3O43295 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.28■■□□□ 1.48
SRGAP3O43295 AP002982.1-201ENST00000492365 877 ntBASIC24.28■■□□□ 1.48
SRGAP3O43295 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.28■■□□□ 1.48
SRGAP3O43295 TREX1-205ENST00000625293 1783 ntBASIC24.28■■□□□ 1.48
SRGAP3O43295 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SRGAP3O43295 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SRGAP3O43295 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
SRGAP3O43295 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SRGAP3O43295 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SRGAP3O43295 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SRGAP3O43295 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRGAP3O43295 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SRGAP3O43295 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.27■■□□□ 1.48
SRGAP3O43295 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.27■■□□□ 1.48
SRGAP3O43295 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRGAP3O43295 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRGAP3O43295 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SRGAP3O43295 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.27■■□□□ 1.48
SRGAP3O43295 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.27■■□□□ 1.48
SRGAP3O43295 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SRGAP3O43295 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.27■■□□□ 1.48
SRGAP3O43295 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms