Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.44■■□□□ 1.02
TNRC18O15417 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.44■■□□□ 1.02
TNRC18O15417 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNRC18O15417 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNRC18O15417 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNRC18O15417 MIR7706-201ENST00000613747 67 ntBASIC21.43■■□□□ 1.02
TNRC18O15417 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.43■■□□□ 1.02
TNRC18O15417 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNRC18O15417 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TNRC18O15417 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNRC18O15417 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNRC18O15417 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.43■■□□□ 1.02
TNRC18O15417 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.43■■□□□ 1.02
TNRC18O15417 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNRC18O15417 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.43■■□□□ 1.02
TNRC18O15417 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.43■■□□□ 1.02
TNRC18O15417 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.43■■□□□ 1.02
TNRC18O15417 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.42■■□□□ 1.02
TNRC18O15417 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.42■■□□□ 1.02
TNRC18O15417 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TNRC18O15417 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TNRC18O15417 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.42■■□□□ 1.02
TNRC18O15417 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TNRC18O15417 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TNRC18O15417 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.42■■□□□ 1.02
TNRC18O15417 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.42■■□□□ 1.02
TNRC18O15417 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNRC18O15417 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.42■■□□□ 1.02
TNRC18O15417 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.42■■□□□ 1.02
TNRC18O15417 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.42■■□□□ 1.02
TNRC18O15417 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.42■■□□□ 1.02
TNRC18O15417 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.42■■□□□ 1.02
TNRC18O15417 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TNRC18O15417 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 LINC00265-3P-201ENST00000447588 903 ntBASIC21.41■■□□□ 1.02
TNRC18O15417 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.41■■□□□ 1.02
TNRC18O15417 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.41■■□□□ 1.02
TNRC18O15417 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.41■■□□□ 1.02
TNRC18O15417 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TNRC18O15417 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
TNRC18O15417 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.41■■□□□ 1.02
TNRC18O15417 RPS8P6-201ENST00000426177 609 ntBASIC21.41■■□□□ 1.02
TNRC18O15417 COX20P2-201ENST00000452636 358 ntBASIC21.41■■□□□ 1.02
TNRC18O15417 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.41■■□□□ 1.02
TNRC18O15417 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNRC18O15417 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 DNAJB3-202ENST00000449667 1266 ntBASIC21.4■■□□□ 1.02
TNRC18O15417 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.4■■□□□ 1.02
TNRC18O15417 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.4■■□□□ 1.02
TNRC18O15417 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.4■■□□□ 1.02
TNRC18O15417 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.4■■□□□ 1.02
TNRC18O15417 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.4■■□□□ 1.02
TNRC18O15417 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.4■■□□□ 1.02
TNRC18O15417 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.4■■□□□ 1.02
TNRC18O15417 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.4■■□□□ 1.02
TNRC18O15417 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNRC18O15417 AC004967.1-201ENST00000453589 447 ntBASIC21.39■■□□□ 1.02
TNRC18O15417 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
TNRC18O15417 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.39■■□□□ 1.02
TNRC18O15417 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.39■■□□□ 1.01
TNRC18O15417 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.39■■□□□ 1.01
TNRC18O15417 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.39■■□□□ 1.01
TNRC18O15417 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 AC009065.1-201ENST00000564055 1225 ntBASIC21.39■■□□□ 1.01
TNRC18O15417 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
TNRC18O15417 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.39■■□□□ 1.01
TNRC18O15417 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TNRC18O15417 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TNRC18O15417 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms