Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 HMGA1P5-201ENST00000412453 271 ntBASIC23.39■■□□□ 1.33
FOXN1O15353 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.39■■□□□ 1.33
FOXN1O15353 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.39■■□□□ 1.33
FOXN1O15353 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.39■■□□□ 1.33
FOXN1O15353 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
FOXN1O15353 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.39■■□□□ 1.33
FOXN1O15353 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
FOXN1O15353 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.38■■□□□ 1.33
FOXN1O15353 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 AL022342.1-201ENST00000400363 863 ntBASIC23.38■■□□□ 1.33
FOXN1O15353 AL845331.1-201ENST00000424978 1190 ntBASIC23.38■■□□□ 1.33
FOXN1O15353 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.38■■□□□ 1.33
FOXN1O15353 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.38■■□□□ 1.33
FOXN1O15353 KRT8P45-201ENST00000414328 1447 ntBASIC23.38■■□□□ 1.33
FOXN1O15353 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.38■■□□□ 1.33
FOXN1O15353 AC121338.2-201ENST00000622535 1744 ntBASIC23.38■■□□□ 1.33
FOXN1O15353 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
FOXN1O15353 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.38■■□□□ 1.33
FOXN1O15353 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXN1O15353 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN1O15353 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.37■■□□□ 1.33
FOXN1O15353 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.37■■□□□ 1.33
FOXN1O15353 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN1O15353 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.37■■□□□ 1.33
FOXN1O15353 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN1O15353 COX11P1-201ENST00000489116 835 ntBASIC23.37■■□□□ 1.33
FOXN1O15353 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.37■■□□□ 1.33
FOXN1O15353 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN1O15353 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.37■■□□□ 1.33
FOXN1O15353 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN1O15353 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN1O15353 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXN1O15353 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN1O15353 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.37■■□□□ 1.33
FOXN1O15353 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
FOXN1O15353 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 MESTP1-201ENST00000404287 994 ntBASIC23.36■■□□□ 1.33
FOXN1O15353 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.36■■□□□ 1.33
FOXN1O15353 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.36■■□□□ 1.33
FOXN1O15353 KRT17P6-201ENST00000453795 1220 ntBASIC23.36■■□□□ 1.33
FOXN1O15353 AL671277.2-201ENST00000458060 996 ntBASIC23.36■■□□□ 1.33
FOXN1O15353 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.36■■□□□ 1.33
FOXN1O15353 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.36■■□□□ 1.33
FOXN1O15353 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
FOXN1O15353 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
FOXN1O15353 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.36■■□□□ 1.33
FOXN1O15353 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.36■■□□□ 1.33
FOXN1O15353 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXN1O15353 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
FOXN1O15353 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.35■■□□□ 1.33
FOXN1O15353 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 AC139530.3-201ENST00000620344 690 ntBASIC23.35■■□□□ 1.33
FOXN1O15353 AC011558.1-201ENST00000623459 338 ntBASIC23.35■■□□□ 1.33
FOXN1O15353 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.35■■□□□ 1.33
FOXN1O15353 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
FOXN1O15353 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXN1O15353 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.35■■□□□ 1.33
FOXN1O15353 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN1O15353 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
FOXN1O15353 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXN1O15353 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXN1O15353 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXN1O15353 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.34■■□□□ 1.33
FOXN1O15353 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN1O15353 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXN1O15353 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXN1O15353 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXN1O15353 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
FOXN1O15353 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.33■■□□□ 1.33
FOXN1O15353 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXN1O15353 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FOXN1O15353 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms