Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMAD9O15198 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
SMAD9O15198 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMAD9O15198 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SMAD9O15198 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.71■□□□□ 0.43
SMAD9O15198 AL121829.2-201ENST00000620908 328 ntBASIC17.71■□□□□ 0.43
SMAD9O15198 AL121906.2-201ENST00000621597 723 ntBASIC17.71■□□□□ 0.43
SMAD9O15198 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD9O15198 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
SMAD9O15198 TMEM191A-211ENST00000637163 1067 ntBASIC17.71■□□□□ 0.43
SMAD9O15198 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.71■□□□□ 0.43
SMAD9O15198 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.71■□□□□ 0.43
SMAD9O15198 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMAD9O15198 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.71■□□□□ 0.43
SMAD9O15198 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
SMAD9O15198 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMAD9O15198 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMAD9O15198 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMAD9O15198 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 AC116351.2-201ENST00000606540 1585 ntBASIC17.7■□□□□ 0.42
SMAD9O15198 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.7■□□□□ 0.42
SMAD9O15198 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMAD9O15198 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMAD9O15198 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 AC018553.1-201ENST00000616682 1458 ntBASIC17.69■□□□□ 0.42
SMAD9O15198 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMAD9O15198 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 PRORSD1P-201ENST00000295112 541 ntBASIC17.69■□□□□ 0.42
SMAD9O15198 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD9O15198 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD9O15198 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.69■□□□□ 0.42
SMAD9O15198 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 MTDHP1-201ENST00000605323 784 ntBASIC17.69■□□□□ 0.42
SMAD9O15198 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SMAD9O15198 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SMAD9O15198 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD9O15198 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.69■□□□□ 0.42
SMAD9O15198 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD9O15198 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD9O15198 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD9O15198 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD9O15198 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD9O15198 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.68■□□□□ 0.42
SMAD9O15198 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms