Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 YBX1P10-201ENST00000444752 975 ntBASIC19.74■□□□□ 0.75
AP3B1O00203 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.74■□□□□ 0.75
AP3B1O00203 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.74■□□□□ 0.75
AP3B1O00203 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.74■□□□□ 0.75
AP3B1O00203 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.74■□□□□ 0.75
AP3B1O00203 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.74■□□□□ 0.75
AP3B1O00203 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
AP3B1O00203 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
AP3B1O00203 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.73■□□□□ 0.75
AP3B1O00203 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.73■□□□□ 0.75
AP3B1O00203 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.73■□□□□ 0.75
AP3B1O00203 AL109923.1-201ENST00000618799 583 ntBASIC19.73■□□□□ 0.75
AP3B1O00203 AL121829.2-201ENST00000620908 328 ntBASIC19.73■□□□□ 0.75
AP3B1O00203 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP3B1O00203 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP3B1O00203 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP3B1O00203 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.73■□□□□ 0.75
AP3B1O00203 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3B1O00203 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
AP3B1O00203 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.72■□□□□ 0.75
AP3B1O00203 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP3B1O00203 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
AP3B1O00203 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.72■□□□□ 0.75
AP3B1O00203 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.72■□□□□ 0.75
AP3B1O00203 AC120498.8-201ENST00000614275 531 ntBASIC19.72■□□□□ 0.75
AP3B1O00203 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP3B1O00203 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3B1O00203 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
AP3B1O00203 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.71■□□□□ 0.75
AP3B1O00203 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.71■□□□□ 0.75
AP3B1O00203 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP3B1O00203 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 AC069152.1-201ENST00000438030 544 ntBASIC19.71■□□□□ 0.75
AP3B1O00203 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.71■□□□□ 0.75
AP3B1O00203 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.71■□□□□ 0.75
AP3B1O00203 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3B1O00203 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.71■□□□□ 0.75
AP3B1O00203 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP3B1O00203 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3B1O00203 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.71■□□□□ 0.75
AP3B1O00203 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms