Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 AL591742.1-201ENST00000604433 565 ntBASIC21.09■□□□□ 0.97
CCDC66A2RUB6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 TERF1P5-201ENST00000477545 1207 ntBASIC21.08■□□□□ 0.97
CCDC66A2RUB6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC66A2RUB6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC66A2RUB6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 AC005332.7-201ENST00000614046 2005 ntBASIC21.07■□□□□ 0.96
CCDC66A2RUB6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 RARRES2P6-201ENST00000567333 442 ntBASIC21.07■□□□□ 0.96
CCDC66A2RUB6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 AC010536.3-201ENST00000620306 533 ntBASIC21.07■□□□□ 0.96
CCDC66A2RUB6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC66A2RUB6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 AL162412.1-201ENST00000567129 965 ntBASIC21.06■□□□□ 0.96
CCDC66A2RUB6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.06■□□□□ 0.96
CCDC66A2RUB6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
CCDC66A2RUB6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms