Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 AC026310.3-201ENST00000625186 2373 ntBASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 AL031133.1-201ENST00000406807 723 ntBASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 KRT8P8-201ENST00000434750 1448 ntBASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 AC092338.2-201ENST00000568827 1415 ntBASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC187A0A096LP49 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 Z85996.1-201ENST00000494644 937 ntBASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AC141257.4-201ENST00000634557 245 ntBASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AC136944.6-201ENST00000634818 245 ntBASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 AF106564.1-201ENST00000607058 2553 ntBASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC187A0A096LP49 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC187A0A096LP49 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 AL023803.3-201ENST00000615559 522 ntBASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 AP000550.4-202ENST00000639755 178 ntBASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 AL031432.5-201ENST00000641059 760 ntBASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC187A0A096LP49 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms