Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 TDGF1P1-201ENST00000445734 527 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AL691482.1-201ENST00000453255 87 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 CTSLP6-201ENST00000458273 1002 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 RNA5SP360-201ENST00000516555 118 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 NPM1P52-201ENST00000518264 846 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC067838.1-201ENST00000606064 577 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC016911.1-201ENST00000613297 452 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 AC009237.17-201ENST00000618111 748 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 MIR6823-201ENST00000622118 61 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.16□□□□□ -1.58
VIPAS39Q9H9C1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 AC009643.2-201ENST00000603543 1448 ntBASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
VIPAS39Q9H9C1 TMSB4XP2-201ENST00000335179 210 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RNU1-108P-201ENST00000362556 161 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC083799.1-201ENST00000366451 910 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AL607077.1-201ENST00000401718 499 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 OR4K12P-201ENST00000406538 961 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RPS29P10-201ENST00000439197 166 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC019185.1-201ENST00000442718 389 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LRRC37A14P-201ENST00000452297 462 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RN7SL799P-201ENST00000475891 298 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RPL29P23-201ENST00000486188 442 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RPS4XP18-201ENST00000495480 763 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RN7SL558P-201ENST00000497468 299 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC093890.1-201ENST00000502554 540 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 GUSBP9-201ENST00000510138 584 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 Y_RNA.667-201ENST00000516212 107 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 NRBF2P4-201ENST00000520874 850 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AP001000.1-201ENST00000526843 742 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC005000.1-201ENST00000536192 288 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC067805.1-201ENST00000559344 470 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC011500.1-201ENST00000601963 469 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC104687.2-201ENST00000604442 342 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AL451049.1-201ENST00000608672 497 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AP001437.1-201ENST00000608783 456 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC055839.1-201ENST00000634467 498 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 AC007382.1-201ENST00000624376 2618 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 LINC01109-201ENST00000603837 3081 ntBASIC5.15□□□□□ -1.59
VIPAS39Q9H9C1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
VIPAS39Q9H9C1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms