Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 SNORA2.3-201ENST00000383920 135 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 MIR141-201ENST00000384975 95 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC104333.2-201ENST00000422630 192 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC005033.1-201ENST00000428904 813 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 CYCSP24-201ENST00000445119 316 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC009127.1-201ENST00000467090 155 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 MIR4697-201ENST00000582977 78 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC138965.3-201ENST00000623875 498 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AL138820.1-201ENST00000617901 5305 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 AC011447.7-201ENST00000624228 1590 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 CASC19-221ENST00000641309 1382 ntBASIC6.06□□□□□ -1.44
UPF3BQ9BZI7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC010132.2-201ENST00000295493 1043 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC013442.1-201ENST00000397347 228 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 NUDT19P3-201ENST00000404698 555 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 TPT1P13-201ENST00000449760 499 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC009220.1-201ENST00000451614 275 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 RN7SL222P-201ENST00000476452 299 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AP001922.4-201ENST00000526967 290 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC074050.1-201ENST00000563247 211 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AF230666.2-201ENST00000602328 725 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 BX005214.3-202ENST00000619809 325 ntBASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UPF3BQ9BZI7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 RNU1-43P-201ENST00000365052 165 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AL035419.1-201ENST00000397037 564 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AL356967.1-201ENST00000406305 431 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 COX6CP13-201ENST00000428703 226 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC245047.2-201ENST00000441060 530 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 Z80107.2-201ENST00000445127 392 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 842.8 ms