Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 AC136428.4-201ENST00000634254 1155 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 GVINP1-202ENST00000531871 7271 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 AP004607.3-201ENST00000530354 3915 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 PSG10P-201ENST00000501199 1500 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 CAP1P2-201ENST00000417455 1409 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.74□□□□□ -1.49
TRIM54Q9BYV2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC114774.1-201ENST00000507410 1770 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 RNU6-185P-201ENST00000384421 107 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 SNORD65C-201ENST00000390962 71 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL021331.1-201ENST00000402817 582 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC246680.2-201ENST00000422106 389 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC092170.1-201ENST00000440211 356 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 EIF5AP4-201ENST00000441206 465 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL353093.1-201ENST00000441292 436 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 MTATP6P26-201ENST00000445926 662 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 MTCYBP11-201ENST00000447254 1109 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 PTGES3P5-201ENST00000455109 434 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 YRDCP3-201ENST00000456507 480 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL157777.1-201ENST00000468100 304 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL122020.1-201ENST00000472287 459 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 ATP5F1P7-201ENST00000567330 760 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 MIR4776-2-201ENST00000580204 80 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 SS18L2P2-201ENST00000583960 235 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC145207.9-201ENST00000623802 325 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AC017104.5-201ENST00000637647 639 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL596275.2-207ENST00000641188 675 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 AL161912.4-201ENST00000623889 2468 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 LYARP1-201ENST00000436977 1501 ntBASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM54Q9BYV2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC027088.4-201ENST00000611559 1947 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AL035419.1-201ENST00000397037 564 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AL136131.1-201ENST00000406079 803 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 HMGB3P18-201ENST00000406327 590 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 MTCO1P52-201ENST00000433928 531 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms