Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC091135.1-201ENST00000585943 307 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC100767.2-201ENST00000604840 693 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC006270.3-201ENST00000605967 1036 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC118658.2-201ENST00000618697 459 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 NXF4-202ENST00000416098 1465 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC027279.4-201ENST00000624371 2072 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 OFD1P17-201ENST00000437639 3018 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC007382.1-201ENST00000624376 2618 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 SNORA74A-201ENST00000364089 198 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RNU6-1283P-201ENST00000365314 105 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 Y_RNA.359-201ENST00000365498 102 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RN7SKP166-201ENST00000410812 305 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RN7SKP121-201ENST00000410842 305 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RN7SKP142-201ENST00000411236 328 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MTND4P28-201ENST00000426217 387 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 NANOGP4-201ENST00000427230 913 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 Z74696.2-201ENST00000436514 498 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC023141.3-201ENST00000436698 278 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RAB28P3-201ENST00000448325 597 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RPL31P15-201ENST00000449770 338 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 HLA-DPA3-207ENST00000454398 229 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AL359385.1-201ENST00000456509 365 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RN7SL273P-201ENST00000481561 299 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RPL9P33-201ENST00000484311 566 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 RPL34P33-201ENST00000486062 334 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC113347.3-201ENST00000509113 148 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 HIGD1AP10-201ENST00000527837 282 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 HIGD1AP5-201ENST00000529959 259 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC007956.1-201ENST00000555623 542 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AL392112.1-201ENST00000605115 829 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC004223.4-201ENST00000612426 332 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AC008498.1-201ENST00000613012 531 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 AP002370.1-201ENST00000528055 1602 ntBASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNGAP1Q96PV0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 RNU6-1251P-201ENST00000364502 107 ntBASIC7.16□□□□□ -1.26
SYNGAP1Q96PV0 AL391422.1-201ENST00000402155 436 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms