Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DUXAP3-201ENST00000603616 594 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC108738.1-201ENST00000603703 237 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC002487.1-201ENST00000604565 994 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL031601.1-201ENST00000605702 394 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MIR6780B-201ENST00000610307 79 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC025574.2-201ENST00000615621 514 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC006386.1-201ENST00000619436 415 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC008115.4-201ENST00000619780 775 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL591926.1-201ENST00000620542 217 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC022079.1-201ENST00000621546 602 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AP002791.1-201ENST00000623291 381 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC017104.5-201ENST00000637647 639 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC100757.1-201ENST00000616872 1835 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC003985.2-201ENST00000562268 1669 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 MAPK10-328ENST00000641553 4009 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 NCOA4P2-201ENST00000340589 1813 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RN7SKP69-201ENST00000365390 305 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RNU6-31P-201ENST00000384388 108 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 SNORD56.6-201ENST00000384569 71 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 MTND4P13-201ENST00000402078 1023 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC099535.1-201ENST00000408928 371 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CDY17P-201ENST00000414121 1282 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC066692.1-201ENST00000421721 457 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AL035660.1-201ENST00000422041 222 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CDY8P-201ENST00000428380 1279 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AL022331.1-201ENST00000429025 477 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC069154.1-201ENST00000432914 542 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 USP9YP24-201ENST00000434374 697 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 USP9YP17-201ENST00000444617 696 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 Z73417.1-201ENST00000447373 778 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CDY20P-201ENST00000447528 1279 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RN7SL649P-201ENST00000496974 275 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC147055.3-201ENST00000510547 851 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 OR10V3P-201ENST00000525712 725 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 GTF2IP11-201ENST00000526931 420 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 HMGB1P42-201ENST00000532126 553 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 OR4A43P-201ENST00000532938 908 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC092121.1-201ENST00000569452 202 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 BNIP3P24-201ENST00000593398 557 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RN7SL544P-201ENST00000617232 284 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 RN7SL763P-201ENST00000620922 284 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AC004232.3-201ENST00000622977 525 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CAP1P2-201ENST00000417455 1409 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 MFSD8-213ENST00000641134 1327 ntBASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4AQ8WYN0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 HSPD1P11-201ENST00000508643 1702 ntBASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4AQ8WYN0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms