Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 AC000367.1-201ENST00000452711 1766 ntBASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 SGO1P2-201ENST00000429458 1589 ntBASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 HDAC1P2-201ENST00000453661 1398 ntBASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 AP001541.1-201ENST00000623322 1904 ntBASIC5.8□□□□□ -1.48
PIK3C3Q8NEB9 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 RNA5SP453-201ENST00000362503 119 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ATP5F1P3-201ENST00000397213 657 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ARSFP1-201ENST00000398758 477 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 HMGB3P18-201ENST00000406327 590 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC027644.1-201ENST00000419595 298 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL593851.1-201ENST00000426171 157 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC083862.1-201ENST00000427378 1242 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL645939.3-201ENST00000435408 225 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 KRT8P51-201ENST00000438938 274 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC00888-204ENST00000487386 421 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC113191.1-201ENST00000517759 403 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 HMGN1P26-201ENST00000558737 303 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 SYPL1P2-201ENST00000582878 727 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL031281.1-201ENST00000604049 488 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL163642.2-201ENST00000604722 1019 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AL392112.1-201ENST00000605115 829 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC122133.1-201ENST00000613964 233 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC105227.2-201ENST00000615075 605 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC068213.1-201ENST00000625124 226 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AC073869.7-201ENST00000640874 297 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ZNF733P-202ENST00000444809 1573 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 MTND4P4-201ENST00000439033 1366 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 PPBPP2-201ENST00000513150 1362 ntBASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.79□□□□□ -1.48
PIK3C3Q8NEB9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 BX276092.6-201ENST00000430476 250 ntBASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PIK3C3Q8NEB9 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms