Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 RNU6-252P-201ENST00000363232 107 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 MIR130A-201ENST00000385274 89 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AL357752.1-201ENST00000412817 349 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 NIFKP3-201ENST00000417799 865 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AMYP1-201ENST00000440059 1023 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AL357520.1-201ENST00000441557 453 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 RPS23P9-201ENST00000448848 438 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 CYCSP42-201ENST00000450823 238 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC110749.1-201ENST00000462007 357 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 COX6B1P2-201ENST00000489624 230 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC098799.1-201ENST00000504752 800 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 IGKV2-36-201ENST00000519999 223 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC079905.1-201ENST00000549280 475 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC084757.1-201ENST00000559987 490 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 DHFRP1-201ENST00000579682 559 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 MIR4512-201ENST00000583257 77 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 NF1P5-201ENST00000588287 448 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 MIR6889-201ENST00000613185 59 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC022919.1-201ENST00000624979 626 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 AC011933.2-201ENST00000578539 2790 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 USP9YP4-201ENST00000424401 1745 ntBASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.23□□□□□ -1.57
LSMEM1Q8N8F7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 RNA5SP273-201ENST00000362484 113 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 RNU1-150P-201ENST00000362491 162 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 RNU1-65P-201ENST00000363919 148 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 MRPL53P1-201ENST00000414323 319 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AL357078.2-201ENST00000416486 427 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC073136.2-201ENST00000417282 849 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AK4P4-201ENST00000419465 646 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC126120.1-201ENST00000431082 470 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC138761.5-201ENST00000433967 325 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 NDUFS5P5-201ENST00000437256 321 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 IFNWP4-201ENST00000453148 294 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 PGBD4P4-201ENST00000509673 613 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC111000.6-201ENST00000514471 709 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC115085.1-201ENST00000588924 229 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 ZNF92P2-201ENST00000600543 1059 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC079880.2-201ENST00000603790 1213 ntBASIC5.22□□□□□ -1.57
LSMEM1Q8N8F7 AC048341.3-201ENST00000619323 491 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms