Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5□□□□□ -1.61
SHFQ7M4L6 DUTP7-201ENST00000507982 486 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC021193.1-201ENST00000511607 420 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHFQ7M4L6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5□□□□□ -1.61
SHFQ7M4L6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 OR1E3-201ENST00000575608 948 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 RN7SL290P-201ENST00000578661 300 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 MIR4311-201ENST00000580794 100 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 MIR7853-201ENST00000584820 132 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC013244.3-201ENST00000605614 388 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5□□□□□ -1.61
SHFQ7M4L6 DUXAP10-204ENST00000612052 616 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 VN1R9P-201ENST00000614184 867 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
SHFQ7M4L6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5□□□□□ -1.61
SHFQ7M4L6 FRG1EP-201ENST00000634469 770 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5□□□□□ -1.61
SHFQ7M4L6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHFQ7M4L6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHFQ7M4L6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
SHFQ7M4L6 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5□□□□□ -1.61
SHFQ7M4L6 AC116158.1-201ENST00000560231 2129 ntBASIC5□□□□□ -1.61
SHFQ7M4L6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHFQ7M4L6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SHFQ7M4L6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHFQ7M4L6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 MFSD8-213ENST00000641134 1327 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC083899.1-201ENST00000454465 3819 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 GAPDHP24-201ENST00000328713 983 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 RNU5E-10P-201ENST00000363506 118 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 RNA5SP232-201ENST00000364144 119 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 MT-TP-201ENST00000387461 68 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 FAM183DP-201ENST00000421987 399 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 PNRC2P1-201ENST00000423940 420 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 RPS7P2-201ENST00000435134 607 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 RPL6P5-201ENST00000445678 828 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 IGBP1P3-201ENST00000447449 1000 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 CBX1P2-201ENST00000453841 458 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 CST12P-201ENST00000457644 362 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC020779.1-201ENST00000478757 796 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC122718.2-201ENST00000505325 591 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 SCARNA6.1-201ENST00000516989 238 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC010376.1-201ENST00000522101 334 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 OR8A2P-201ENST00000528631 952 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC084121.1-201ENST00000533882 835 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 ARGFXP2-201ENST00000579304 949 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AP000919.1-202ENST00000581139 1264 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AP005262.1-201ENST00000582646 997 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms