Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 SUGT1P2-201ENST00000379452 992 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RNU6-603P-201ENST00000411403 107 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MTCO3P43-201ENST00000440974 771 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RNU6-1218P-201ENST00000458990 108 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RPS4XP12-201ENST00000461747 709 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RN7SL273P-201ENST00000481561 299 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RPS12P31-201ENST00000491419 398 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC138866.2-201ENST00000508650 584 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RN7SKP238-201ENST00000516483 249 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 RNU6-1308P-201ENST00000516817 103 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC079905.1-201ENST00000549280 475 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MIR4472-2-201ENST00000582069 67 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AP000769.2-201ENST00000602344 396 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL133247.2-201ENST00000603236 482 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 PSMA6P4-201ENST00000603247 718 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MIR6793-201ENST00000612376 63 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL096712.1-201ENST00000614561 159 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 WBP1LP8-201ENST00000617401 327 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MIR6861-201ENST00000618657 64 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC091948.2-201ENST00000636510 279 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 AC100778.3-201ENST00000580060 1750 ntBASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ANKRD55Q3KP44 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 AC090971.4-201ENST00000560291 1800 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 RNA5SP500-201ENST00000364486 119 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 RN7SKP275-201ENST00000364626 301 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 AL158073.1-201ENST00000426848 1104 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 RPS20P1-201ENST00000434853 354 ntBASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.51□□□□□ -1.69
ANKRD55Q3KP44 NIFKP7-201ENST00000503365 834 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms