Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.88□□□□□ -1.63
EFNB3Q15768 TPT1P1-201ENST00000458495 518 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RN7SL72P-201ENST00000460697 269 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 ATP5LP3-201ENST00000514223 304 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RNA5SP362-201ENST00000516048 118 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 snoU109.5-201ENST00000516231 132 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 SCARNA21.2-201ENST00000516600 166 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 SNORA31.13-201ENST00000516624 135 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.88□□□□□ -1.63
EFNB3Q15768 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC109635.6-201ENST00000525487 1113 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AP003717.3-201ENST00000544832 1180 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AL049830.4-201ENST00000555149 351 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 MIR1273E-201ENST00000581165 102 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 MIR3176-201ENST00000582210 90 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 CLIC4P2-201ENST00000601934 717 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 RPP40P2-201ENST00000603596 712 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC079610.2-201ENST00000604818 690 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC112220.2-201ENST00000605513 533 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC093673.2-201ENST00000609674 331 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC022467.1-201ENST00000614738 749 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC000095.2-202ENST00000637415 154 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 AC025470.1-201ENST00000510053 2032 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 MFSD8-219ENST00000641228 2559 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
EFNB3Q15768 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
EFNB3Q15768 AC093849.1-201ENST00000563631 2209 ntBASIC4.88□□□□□ -1.63
EFNB3Q15768 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
EFNB3Q15768 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 MT-RNR2-201ENST00000387347 1559 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 AP004607.3-201ENST00000530354 3915 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 SRRM1P3-201ENST00000426911 2678 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 SMG1P7-201ENST00000565246 2704 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EFNB3Q15768 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
EFNB3Q15768 RN7SKP124-201ENST00000364730 341 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
EFNB3Q15768 RNU4-31P-201ENST00000384211 141 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 ATF1P1-201ENST00000406040 927 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.87□□□□□ -1.63
EFNB3Q15768 HSPE1P16-201ENST00000426640 348 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.87□□□□□ -1.63
EFNB3Q15768 AC005189.1-201ENST00000431286 310 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 HMGB3P10-201ENST00000434734 572 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 FMO7P-201ENST00000436045 768 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.87□□□□□ -1.63
EFNB3Q15768 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.87□□□□□ -1.63
EFNB3Q15768 AC078899.1-201ENST00000521432 1185 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.87□□□□□ -1.63
EFNB3Q15768 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 NPM1P35-201ENST00000533043 868 ntBASIC4.87□□□□□ -1.63
EFNB3Q15768 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.87□□□□□ -1.63
EFNB3Q15768 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.87□□□□□ -1.63
EFNB3Q15768 RBM22P12-201ENST00000567098 1255 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms