Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.87□□□□□ -1.47
CCNA1P78396 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.87□□□□□ -1.47
CCNA1P78396 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCNA1P78396 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CCNA1P78396 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCNA1P78396 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.87□□□□□ -1.47
CCNA1P78396 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCNA1P78396 AC026951.1-201ENST00000559530 2459 ntBASIC5.87□□□□□ -1.47
CCNA1P78396 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCNA1P78396 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCNA1P78396 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCNA1P78396 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCNA1P78396 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 FABP12P1-201ENST00000401911 322 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 AC119751.6-201ENST00000416712 186 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 AC019050.1-201ENST00000418508 492 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.86□□□□□ -1.47
CCNA1P78396 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.86□□□□□ -1.47
CCNA1P78396 NDUFB4P8-201ENST00000435351 367 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.86□□□□□ -1.47
CCNA1P78396 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 AC073264.2-201ENST00000448886 166 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 AL513533.1-201ENST00000453728 415 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 RN7SL443P-201ENST00000464331 290 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.86□□□□□ -1.47
CCNA1P78396 RPL7P41-201ENST00000485823 957 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 HMGN1P9-201ENST00000515212 298 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 OR5AN2P-201ENST00000534535 896 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCNA1P78396 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.86□□□□□ -1.47
CCNA1P78396 AL023583.1-201ENST00000607518 1143 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCNA1P78396 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 AC006206.1-201ENST00000544842 3387 ntBASIC5.86□□□□□ -1.47
CCNA1P78396 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCNA1P78396 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 AL355834.1-201ENST00000556602 3965 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 SNORA79B-201ENST00000410557 148 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.85□□□□□ -1.47
CCNA1P78396 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 PTP4A1P1-201ENST00000420539 515 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.85□□□□□ -1.47
CCNA1P78396 AC017019.1-201ENST00000426129 261 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 EIF2S2P3-201ENST00000428356 999 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 AC007559.1-201ENST00000428736 355 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 AC090018.1-201ENST00000434369 367 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.85□□□□□ -1.47
CCNA1P78396 FTH1P2-201ENST00000466086 412 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 AC006967.1-201ENST00000467608 589 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 NDUFA5P9-201ENST00000472609 340 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 AC093827.1-201ENST00000480094 861 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 RPL5P22-201ENST00000480199 884 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.85□□□□□ -1.47
CCNA1P78396 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCNA1P78396 AP006289.1-201ENST00000538089 277 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 GCSHP4-201ENST00000538792 439 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.85□□□□□ -1.47
CCNA1P78396 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 AC018552.1-201ENST00000562099 811 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.85□□□□□ -1.47
CCNA1P78396 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 QTRT1P1-201ENST00000604344 1078 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 AC012557.1-201ENST00000607115 611 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.85□□□□□ -1.47
CCNA1P78396 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
CCNA1P78396 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CCNA1P78396 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCNA1P78396 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms