Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HAUS1P3-201ENST00000523909 662 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AP004607.2-201ENST00000533949 322 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC122688.1-201ENST00000541494 223 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 HMGN2P6-201ENST00000551091 273 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AC127381.1-201ENST00000555979 939 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 NMNAT1P5-201ENST00000559657 841 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL109741.3-201ENST00000561748 592 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC060780.2-201ENST00000589047 198 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC069307.1-201ENST00000602820 447 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC008536.1-201ENST00000602872 669 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL391834.1-201ENST00000609609 560 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AC004948.1-201ENST00000609858 672 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AC090527.3-201ENST00000619041 548 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 MIR6730-201ENST00000622213 67 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.5□□□□□ -1.37
RHBDL3P58872 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RHBDL3P58872 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RHBDL3P58872 AL158152.1-201ENST00000602652 1435 ntBASIC6.5□□□□□ -1.37
RHBDL3P58872 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RHBDL3P58872 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.49□□□□□ -1.37
RHBDL3P58872 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RHBDL3P58872 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 AC006206.1-201ENST00000544842 3387 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AL451142.1-201ENST00000375867 775 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 DUTP5-201ENST00000406790 469 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 GNG5P5-201ENST00000420444 220 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.49□□□□□ -1.37
RHBDL3P58872 YWHAZP2-201ENST00000440317 728 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 FHP1-201ENST00000442741 703 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 CLIC4P1-201ENST00000453177 535 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AL389915.2-201ENST00000454576 441 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 RPL15P21-201ENST00000495592 567 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC231760.1-201ENST00000498002 260 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.49□□□□□ -1.37
RHBDL3P58872 SCARNA16.4-201ENST00000516956 187 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.49□□□□□ -1.37
RHBDL3P58872 MIR3691-201ENST00000578066 90 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC098483.2-201ENST00000603158 454 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC079610.2-201ENST00000604818 690 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 AL121890.2-201ENST00000617644 465 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC097460.3-201ENST00000623099 442 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RHBDL3P58872 CYP4F35P-202ENST00000636121 390 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RHBDL3P58872 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
RHBDL3P58872 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.49□□□□□ -1.37
RHBDL3P58872 AP005435.3-201ENST00000531260 3198 ntBASIC6.49□□□□□ -1.37
RHBDL3P58872 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RHBDL3P58872 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 RNU1-43P-201ENST00000365052 165 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 RNU6-452P-201ENST00000384406 107 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RNU1-149P-201ENST00000390870 161 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 HMGB1P13-201ENST00000406019 642 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 NPM1P40-201ENST00000412758 733 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RHBDL3P58872 XKRYP4-201ENST00000414395 483 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.48□□□□□ -1.37
RHBDL3P58872 MTCO3P21-201ENST00000430791 643 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RPS27P5-201ENST00000444247 244 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 XKRYP5-201ENST00000449659 483 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.48□□□□□ -1.37
RHBDL3P58872 SNORD125-201ENST00000459538 96 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 CBX1P5-201ENST00000475330 559 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RPSAP50-201ENST00000481955 852 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RPS27AP16-201ENST00000492222 470 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.48□□□□□ -1.37
RHBDL3P58872 AC108471.1-201ENST00000513977 287 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 GAPDHP62-201ENST00000515313 990 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RN7SKP248-201ENST00000516278 305 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RHBDL3P58872 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RHBDL3P58872 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.48□□□□□ -1.37
RHBDL3P58872 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.48□□□□□ -1.37
RHBDL3P58872 AC022884.3-201ENST00000579571 248 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 AP000769.2-201ENST00000602344 396 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.48□□□□□ -1.37
RHBDL3P58872 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 AC068870.2-201ENST00000620635 389 ntBASIC6.48□□□□□ -1.37
RHBDL3P58872 AC006249.1-201ENST00000621223 471 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms