Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
NUP98P52948 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NUP98P52948 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP98P52948 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NUP98P52948 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
NUP98P52948 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 AC125257.1-201ENST00000560400 2930 ntBASIC6.06□□□□□ -1.44
NUP98P52948 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
NUP98P52948 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP98P52948 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP98P52948 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP98P52948 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP98P52948 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP98P52948 HNRNPRP2-201ENST00000528421 743 ntBASIC6.05□□□□□ -1.44
NUP98P52948 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP98P52948 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP98P52948 AC004232.3-201ENST00000622977 525 ntBASIC6.05□□□□□ -1.44
NUP98P52948 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP98P52948 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NUP98P52948 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP98P52948 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 RNA5SP397-201ENST00000391323 118 ntBASIC6.04□□□□□ -1.44
NUP98P52948 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP98P52948 snoU13.1-201ENST00000459157 104 ntBASIC6.04□□□□□ -1.44
NUP98P52948 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP98P52948 RNU1-6P-201ENST00000516290 144 ntBASIC6.04□□□□□ -1.44
NUP98P52948 AC138701.1-201ENST00000524329 714 ntBASIC6.04□□□□□ -1.44
NUP98P52948 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.04□□□□□ -1.44
NUP98P52948 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP98P52948 Z95327.3-201ENST00000610385 572 ntBASIC6.04□□□□□ -1.44
NUP98P52948 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP98P52948 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 AC011447.7-201ENST00000624228 1590 ntBASIC6.04□□□□□ -1.44
NUP98P52948 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 ZFRP1-201ENST00000457579 2970 ntBASIC6.04□□□□□ -1.44
NUP98P52948 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 AC008758.3-201ENST00000507003 1829 ntBASIC6.04□□□□□ -1.44
NUP98P52948 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NUP98P52948 ARL4AP5-201ENST00000404372 599 ntBASIC6.04□□□□□ -1.44
NUP98P52948 RN7SKP267-201ENST00000410381 285 ntBASIC6.04□□□□□ -1.44
NUP98P52948 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP98P52948 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 AC004980.3-201ENST00000447046 365 ntBASIC6.04□□□□□ -1.44
NUP98P52948 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP98P52948 AC115286.1-201ENST00000604298 434 ntBASIC6.04□□□□□ -1.44
NUP98P52948 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP98P52948 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.03□□□□□ -1.44
NUP98P52948 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP98P52948 RPL32P3-201ENST00000359025 275 ntBASIC6.03□□□□□ -1.44
NUP98P52948 U3.22-201ENST00000391120 215 ntBASIC6.03□□□□□ -1.44
NUP98P52948 CENPIP1-201ENST00000425713 902 ntBASIC6.03□□□□□ -1.44
NUP98P52948 RSL24D1P6-201ENST00000426934 401 ntBASIC6.03□□□□□ -1.44
NUP98P52948 VDAC1P6-201ENST00000430062 855 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AC073143.1-201ENST00000436316 395 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP98P52948 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP98P52948 AL356981.1-201ENST00000454879 684 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AC011276.1-201ENST00000469688 323 ntBASIC6.03□□□□□ -1.44
NUP98P52948 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP98P52948 AC111000.3-201ENST00000508057 576 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP98P52948 BUD31P1-201ENST00000521828 359 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP98P52948 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP98P52948 MIR4420-201ENST00000583944 77 ntBASIC6.03□□□□□ -1.44
NUP98P52948 AL049794.2-201ENST00000616301 365 ntBASIC6.03□□□□□ -1.44
NUP98P52948 OR52H1-202ENST00000641796 1061 ntBASIC6.03□□□□□ -1.44
NUP98P52948 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP98P52948 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP98P52948 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
NUP98P52948 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP98P52948 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP98P52948 OR56B2P-202ENST00000641377 2453 ntBASIC6.02□□□□□ -1.44
NUP98P52948 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms