Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC068538.1-201ENST00000376856 336 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 RNU4-31P-201ENST00000384211 141 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 RNU4-27P-201ENST00000410889 139 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 MTND2P9-201ENST00000422293 931 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.23□□□□□ -1.41
TM4SF4P48230 HSPD1P12-201ENST00000429127 1069 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AC068287.1-201ENST00000430283 295 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 FTLP19-201ENST00000433300 394 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AL512661.1-201ENST00000434586 1253 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 NANOGP9-201ENST00000439890 892 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 RPS27P5-201ENST00000444247 244 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 RPS23P7-201ENST00000466210 444 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.23□□□□□ -1.41
TM4SF4P48230 PPM1AP1-201ENST00000502740 1135 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 IGBP1P5-201ENST00000507524 1000 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 RNU6-1308P-201ENST00000516817 103 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 HAUS1P3-201ENST00000523909 662 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.23□□□□□ -1.41
TM4SF4P48230 PMS2P3-207ENST00000529061 717 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AC021006.3-201ENST00000530771 192 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AP006289.1-201ENST00000538089 277 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 TOMM20P2-201ENST00000540082 421 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AP005403.1-201ENST00000579720 229 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AL031320.1-201ENST00000604177 357 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 BNIP3P35-201ENST00000604530 490 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC095038.2-201ENST00000621464 1070 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.23□□□□□ -1.41
TM4SF4P48230 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC005224.3-201ENST00000584683 2140 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TM4SF4P48230 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 RNA5SP505-201ENST00000364748 108 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 RPL7P58-201ENST00000402913 758 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AL136131.1-201ENST00000406079 803 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AL034374.1-201ENST00000406329 351 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 RNU2-50P-201ENST00000410494 143 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 FCF1P6-201ENST00000456841 595 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 ATP5G1P3-201ENST00000463301 410 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AC103987.1-201ENST00000473394 348 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AC020779.1-201ENST00000478757 796 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 RPL7P40-201ENST00000481703 745 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AC119751.4-201ENST00000507498 357 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 GTF2F2P1-201ENST00000511083 675 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 SOX5P1-201ENST00000524155 1127 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 MTND5P21-201ENST00000531961 522 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 YWHABP2-201ENST00000540201 713 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.22□□□□□ -1.41
TM4SF4P48230 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 ATP5J2P6-201ENST00000565203 266 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.22□□□□□ -1.41
TM4SF4P48230 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 MIR6758-201ENST00000620653 63 ntBASIC6.22□□□□□ -1.41
TM4SF4P48230 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM4SF4P48230 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.22□□□□□ -1.41
TM4SF4P48230 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TM4SF4P48230 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TM4SF4P48230 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms