Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.79□□□□□ -1.64
RFC3P40938 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 AC009237.13-201ENST00000603193 276 ntBASIC4.79□□□□□ -1.64
RFC3P40938 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.79□□□□□ -1.64
RFC3P40938 AC244107.2-201ENST00000611773 76 ntBASIC4.79□□□□□ -1.64
RFC3P40938 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 AC015660.5-201ENST00000623238 564 ntBASIC4.79□□□□□ -1.64
RFC3P40938 AC099494.2-201ENST00000623371 978 ntBASIC4.79□□□□□ -1.64
RFC3P40938 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFC3P40938 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
RFC3P40938 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.79□□□□□ -1.64
RFC3P40938 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFC3P40938 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
RFC3P40938 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 RNA5SP305-201ENST00000362665 119 ntBASIC4.78□□□□□ -1.64
RFC3P40938 MIR550A3-201ENST00000390735 95 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AL589994.1-201ENST00000404962 340 ntBASIC4.78□□□□□ -1.64
RFC3P40938 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.78□□□□□ -1.64
RFC3P40938 MTND4LP21-201ENST00000415303 295 ntBASIC4.78□□□□□ -1.64
RFC3P40938 EI24P4-201ENST00000423683 1078 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC009784.1-201ENST00000426484 460 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.78□□□□□ -1.64
RFC3P40938 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 RN7SL97P-201ENST00000486780 299 ntBASIC4.78□□□□□ -1.64
RFC3P40938 NDUFB5P1-201ENST00000508134 564 ntBASIC4.78□□□□□ -1.64
RFC3P40938 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 AC091912.1-201ENST00000511351 248 ntBASIC4.78□□□□□ -1.64
RFC3P40938 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 HMGN1P9-201ENST00000515212 298 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AL671862.1-201ENST00000515851 349 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC013701.1-201ENST00000522657 465 ntBASIC4.78□□□□□ -1.64
RFC3P40938 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC008126.1-201ENST00000549019 480 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.78□□□□□ -1.64
RFC3P40938 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 MIR4646-201ENST00000580775 63 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC108738.1-201ENST00000603703 237 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC009597.2-201ENST00000604659 592 ntBASIC4.78□□□□□ -1.64
RFC3P40938 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.78□□□□□ -1.64
RFC3P40938 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
RFC3P40938 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RFC3P40938 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.78□□□□□ -1.64
RFC3P40938 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC3P40938 HSPA8P18-201ENST00000439846 1928 ntBASIC4.78□□□□□ -1.64
RFC3P40938 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.78□□□□□ -1.65
RFC3P40938 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 AC100757.1-201ENST00000616872 1835 ntBASIC4.77□□□□□ -1.65
RFC3P40938 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 AL450345.1-202ENST00000605741 3881 ntBASIC4.77□□□□□ -1.65
RFC3P40938 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 RNU1-146P-201ENST00000364015 165 ntBASIC4.77□□□□□ -1.65
RFC3P40938 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 AL133482.1-201ENST00000415988 498 ntBASIC4.77□□□□□ -1.65
RFC3P40938 AC234781.4-201ENST00000419384 244 ntBASIC4.77□□□□□ -1.65
RFC3P40938 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 NDUFB4P8-201ENST00000435351 367 ntBASIC4.77□□□□□ -1.65
RFC3P40938 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 IGBP1P4-201ENST00000503202 879 ntBASIC4.77□□□□□ -1.65
RFC3P40938 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms