Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GCSHP4-201ENST00000538792 439 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC012414.2-201ENST00000559474 187 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC090286.3-201ENST00000573133 187 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC068790.4-201ENST00000602474 263 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC063952.1-203ENST00000634410 658 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL15A1P39059 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.57□□□□□ -1.36
COL15A1P39059 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
COL15A1P39059 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 OR9G4-201ENST00000302957 984 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 RNA5SP453-201ENST00000362503 119 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL15A1P39059 RPL7AP49-201ENST00000429522 581 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AL591438.1-201ENST00000433508 581 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 PRPF38AP2-201ENST00000438179 851 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC112498.1-201ENST00000444401 332 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 RPS15AP29-201ENST00000445539 400 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC073264.2-201ENST00000448886 166 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AL513533.1-201ENST00000453728 415 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC063943.1-201ENST00000465434 453 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 TRBV8-1-201ENST00000481590 279 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.57□□□□□ -1.36
COL15A1P39059 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.57□□□□□ -1.36
COL15A1P39059 SETP12-201ENST00000514068 805 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC104997.1-201ENST00000519761 717 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 BGLT3-201ENST00000564523 994 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.57□□□□□ -1.36
COL15A1P39059 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.57□□□□□ -1.36
COL15A1P39059 AL590396.2-201ENST00000636511 1041 ntBASIC6.57□□□□□ -1.36
COL15A1P39059 AL022323.4-201ENST00000623980 13120 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 AL132656.3-201ENST00000606384 1595 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 RNU1-32P-201ENST00000363937 159 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 RNU1-74P-201ENST00000384108 171 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 NPM1P40-201ENST00000412758 733 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 AL691517.1-201ENST00000440833 1235 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.56□□□□□ -1.36
COL15A1P39059 OR52Y1P-201ENST00000452418 828 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC093267.1-201ENST00000489176 961 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 OR2A3P-201ENST00000493774 953 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.56□□□□□ -1.36
COL15A1P39059 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 OR5AN2P-201ENST00000534535 896 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.56□□□□□ -1.36
COL15A1P39059 AC074050.1-201ENST00000563247 211 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.56□□□□□ -1.36
COL15A1P39059 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.56□□□□□ -1.36
COL15A1P39059 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.56□□□□□ -1.36
COL15A1P39059 MIR6839-201ENST00000620425 113 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 AC006249.1-201ENST00000621223 471 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.56□□□□□ -1.36
COL15A1P39059 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL15A1P39059 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL15A1P39059 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.55□□□□□ -1.36
COL15A1P39059 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL15A1P39059 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL15A1P39059 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.55□□□□□ -1.36
COL15A1P39059 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms