Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 AC011493.1-201ENST00000596753 1632 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AL353625.1-202ENST00000366273 571 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 MIR1271-201ENST00000408537 86 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 SNORA79B-201ENST00000410557 148 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.17□□□□□ -1.58
FDFT1P37268 BTF3P6-201ENST00000448054 499 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 AC093166.2-201ENST00000455969 1017 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 SETP20-201ENST00000457046 852 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 OR2AO1P-201ENST00000476497 403 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 PGAM1P13-201ENST00000507497 754 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AP002981.1-201ENST00000517692 975 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.17□□□□□ -1.58
FDFT1P37268 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.17□□□□□ -1.58
FDFT1P37268 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 FKBP1AP1-201ENST00000594588 318 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AC006272.2-201ENST00000594725 163 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 AP003400.2-201ENST00000624036 666 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FDFT1P37268 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FDFT1P37268 AC097461.1-201ENST00000568928 2821 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
FDFT1P37268 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
FDFT1P37268 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 AC083843.2-201ENST00000568248 6253 ntBASIC5.17□□□□□ -1.58
FDFT1P37268 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FDFT1P37268 SNORA17.1-201ENST00000362945 126 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 RNU6-249P-201ENST00000363016 102 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC013442.1-201ENST00000397347 228 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 SLC35E1P1-201ENST00000419313 864 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 CFL1P1-202ENST00000432948 411 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 TXNP5-201ENST00000441043 315 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 AL356981.1-201ENST00000454879 684 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.16□□□□□ -1.58
FDFT1P37268 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 OR4A46P-201ENST00000527255 933 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 EIF4A2P5-201ENST00000529914 499 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.16□□□□□ -1.58
FDFT1P37268 AL390726.5-202ENST00000564800 256 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 AP002884.5-201ENST00000595053 1132 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC037198.3-201ENST00000616754 526 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC009950.2-201ENST00000636548 183 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AL049767.1-202ENST00000637826 242 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 AC019072.1-201ENST00000604535 1551 ntBASIC5.16□□□□□ -1.58
FDFT1P37268 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
FDFT1P37268 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.16□□□□□ -1.58
FDFT1P37268 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FDFT1P37268 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
FDFT1P37268 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.15□□□□□ -1.58
FDFT1P37268 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
FDFT1P37268 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.15□□□□□ -1.58
FDFT1P37268 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.15□□□□□ -1.58
FDFT1P37268 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FDFT1P37268 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FDFT1P37268 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FDFT1P37268 U3.2-201ENST00000362981 210 ntBASIC5.15□□□□□ -1.59
FDFT1P37268 RN7SKP160-201ENST00000363804 340 ntBASIC5.15□□□□□ -1.59
FDFT1P37268 RNU1-43P-201ENST00000365052 165 ntBASIC5.15□□□□□ -1.59
FDFT1P37268 RN7SKP114-201ENST00000410327 279 ntBASIC5.15□□□□□ -1.59
FDFT1P37268 SETP15-201ENST00000412724 337 ntBASIC5.15□□□□□ -1.59
FDFT1P37268 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms