Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXC8P31273 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC8P31273 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC8P31273 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC8P31273 AC007159.1-201ENST00000566529 4706 ntBASIC5.7□□□□□ -1.5
HOXC8P31273 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
HOXC8P31273 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HOXC8P31273 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 IRF5P1-201ENST00000504852 2164 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC8P31273 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HOXC8P31273 MIR7-1-201ENST00000384871 110 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 MIR589-201ENST00000385238 99 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 AL590139.1-201ENST00000416267 400 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXC8P31273 RPS29P33-201ENST00000456717 146 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 RPL7P41-201ENST00000485823 957 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 RN7SL814P-201ENST00000487715 300 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AC140172.1-201ENST00000502928 141 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AC097173.1-201ENST00000505862 819 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC8P31273 MTND2P31-201ENST00000512602 616 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 BTF3P13-201ENST00000513224 490 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC8P31273 AC087272.1-201ENST00000523624 533 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 GCSHP4-201ENST00000538792 439 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXC8P31273 BGLT3-201ENST00000564523 994 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC8P31273 AC105254.2-201ENST00000603636 436 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AL021368.1-201ENST00000607490 540 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC8P31273 AC015922.4-201ENST00000612568 690 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 AC103798.2-201ENST00000624292 632 ntBASIC5.69□□□□□ -1.5
HOXC8P31273 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXC8P31273 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC8P31273 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HOXC8P31273 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC8P31273 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC8P31273 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 AC132825.1-201ENST00000463573 2247 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC8P31273 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC8P31273 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC8P31273 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC8P31273 OR9G4-201ENST00000302957 984 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC8P31273 RN7SKP153-201ENST00000365026 316 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 MIR137-201ENST00000385223 102 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 RNA5SP105-201ENST00000391123 113 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AP002530.1-201ENST00000405705 684 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 FAR2P2-201ENST00000413041 594 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 FAR2P4-202ENST00000425399 584 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 NPM1P26-201ENST00000426339 738 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC008072.1-201ENST00000434254 824 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 RPL7P11-201ENST00000437586 658 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 BUD31P2-201ENST00000449374 300 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 RBMY2TP-201ENST00000451162 947 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AL513533.1-201ENST00000453728 415 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC8P31273 snoU13.20-201ENST00000459180 104 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AC104629.2-201ENST00000468627 598 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 HMGN1P9-201ENST00000515212 298 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 HIGD1AP5-201ENST00000529959 259 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 MIR4330-201ENST00000579077 105 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC011626.1-201ENST00000604710 562 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 AL592494.3-201ENST00000609485 464 ntBASIC5.68□□□□□ -1.5
HOXC8P31273 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC8P31273 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC8P31273 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC8P31273 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
HOXC8P31273 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms