Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 BNIP3P41-202ENST00000616656 861 ntBASIC4.75□□□□□ -1.65
SHC1P29353 WBP1LP8-201ENST00000617401 327 ntBASIC4.75□□□□□ -1.65
SHC1P29353 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.75□□□□□ -1.65
SHC1P29353 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.75□□□□□ -1.65
SHC1P29353 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SHC1P29353 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.75□□□□□ -1.65
SHC1P29353 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 AC100778.3-201ENST00000580060 1750 ntBASIC4.75□□□□□ -1.65
SHC1P29353 SMG1P4-204ENST00000523028 4131 ntBASIC4.75□□□□□ -1.65
SHC1P29353 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
SHC1P29353 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
SHC1P29353 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHC1P29353 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHC1P29353 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 AC025574.1-201ENST00000554784 1653 ntBASIC4.74□□□□□ -1.65
SHC1P29353 RARSP1-201ENST00000542842 1418 ntBASIC4.74□□□□□ -1.65
SHC1P29353 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SHC1P29353 Z95331.1-201ENST00000623075 23112 ntBASIC4.74□□□□□ -1.65
SHC1P29353 OR9G4-201ENST00000302957 984 ntBASIC4.74□□□□□ -1.65
SHC1P29353 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHC1P29353 EI24P3-201ENST00000399046 1062 ntBASIC4.74□□□□□ -1.65
SHC1P29353 DUTP5-201ENST00000406790 469 ntBASIC4.74□□□□□ -1.65
SHC1P29353 DHFRP5-201ENST00000406944 564 ntBASIC4.74□□□□□ -1.65
SHC1P29353 PCNPP4-201ENST00000414817 517 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC106901.1-201ENST00000425086 698 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AURKAPS1-201ENST00000451805 1212 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 AC104849.1-201ENST00000462623 405 ntBASIC4.74□□□□□ -1.65
SHC1P29353 RN7SL222P-201ENST00000476452 299 ntBASIC4.74□□□□□ -1.65
SHC1P29353 RN7SL177P-201ENST00000476596 299 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC069304.1-201ENST00000491593 704 ntBASIC4.74□□□□□ -1.65
SHC1P29353 HIGD1AP14-201ENST00000507617 282 ntBASIC4.74□□□□□ -1.65
SHC1P29353 RNA5SP92-201ENST00000516437 110 ntBASIC4.74□□□□□ -1.65
SHC1P29353 SCARNA21.2-201ENST00000516600 166 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AP006245.2-201ENST00000522004 300 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.74□□□□□ -1.65
SHC1P29353 AC006349.1-201ENST00000555526 235 ntBASIC4.74□□□□□ -1.65
SHC1P29353 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AL731537.2-201ENST00000561565 951 ntBASIC4.74□□□□□ -1.65
SHC1P29353 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.74□□□□□ -1.65
SHC1P29353 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AC008814.1-201ENST00000603797 406 ntBASIC4.74□□□□□ -1.65
SHC1P29353 SUMO2P15-201ENST00000604285 278 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC011626.1-201ENST00000604710 562 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.74□□□□□ -1.65
SHC1P29353 AC126915.2-201ENST00000610957 190 ntBASIC4.74□□□□□ -1.65
SHC1P29353 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.74□□□□□ -1.65
SHC1P29353 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC074101.1-201ENST00000637861 241 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AL139254.3-201ENST00000641097 674 ntBASIC4.74□□□□□ -1.65
SHC1P29353 AC092747.4-201ENST00000620519 1861 ntBASIC4.74□□□□□ -1.65
SHC1P29353 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.74□□□□□ -1.65
SHC1P29353 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHC1P29353 TCP1P3-201ENST00000414406 1498 ntBASIC4.74□□□□□ -1.65
SHC1P29353 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHC1P29353 AC019072.1-201ENST00000604535 1551 ntBASIC4.74□□□□□ -1.65
SHC1P29353 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.74□□□□□ -1.65
SHC1P29353 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.73□□□□□ -1.65
SHC1P29353 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.73□□□□□ -1.65
SHC1P29353 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
SHC1P29353 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 U3.3-201ENST00000362986 216 ntBASIC4.73□□□□□ -1.65
SHC1P29353 RNU1-19P-201ENST00000363306 165 ntBASIC4.73□□□□□ -1.65
SHC1P29353 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms