Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 CASC19-264ENST00000641912 1184 ntBASIC7.38□□□□□ -1.23
LMNB1P20700 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.38□□□□□ -1.23
LMNB1P20700 AC010168.2-201ENST00000562691 5428 ntBASIC7.38□□□□□ -1.23
LMNB1P20700 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
LMNB1P20700 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LMNB1P20700 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
LMNB1P20700 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.38□□□□□ -1.23
LMNB1P20700 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.38□□□□□ -1.23
LMNB1P20700 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMNB1P20700 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMNB1P20700 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LMNB1P20700 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMNB1P20700 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LMNB1P20700 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LMNB1P20700 HSPD1P7-201ENST00000447985 1686 ntBASIC7.38□□□□□ -1.23
LMNB1P20700 AL355377.1-201ENST00000621125 1653 ntBASIC7.38□□□□□ -1.23
LMNB1P20700 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
LMNB1P20700 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LMNB1P20700 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 CASC19-248ENST00000641674 1356 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 ZNF542P-204ENST00000482727 1305 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 NCOA4P2-201ENST00000340589 1813 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 ICE2P1-201ENST00000512800 1849 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LMNB1P20700 FAM133CP-201ENST00000332869 704 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LMNB1P20700 RSL24D1P4-201ENST00000400938 484 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 RPL23AP27-201ENST00000415161 451 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 MTCO1P21-201ENST00000416634 589 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 GTF2IP2-201ENST00000424290 697 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 PRELID3BP10-201ENST00000431957 584 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 HSFY3P-201ENST00000444242 1191 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.37□□□□□ -1.23
LMNB1P20700 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.37□□□□□ -1.23
LMNB1P20700 OR51B8P-201ENST00000449892 769 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AL133477.1-201ENST00000457472 514 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 RPL5P12-201ENST00000477071 851 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 MTND5P13-201ENST00000513046 1079 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 RNU6-1334P-201ENST00000516032 105 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.37□□□□□ -1.23
LMNB1P20700 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AL391156.1-201ENST00000554965 554 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AC004825.1-201ENST00000555068 586 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 AL049872.1-201ENST00000556323 322 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AC012213.3-201ENST00000577199 777 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.37□□□□□ -1.23
LMNB1P20700 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 AL021918.2-201ENST00000613415 194 ntBASIC7.37□□□□□ -1.23
LMNB1P20700 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LMNB1P20700 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.37□□□□□ -1.23
LMNB1P20700 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.37□□□□□ -1.23
LMNB1P20700 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMNB1P20700 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.37□□□□□ -1.23
LMNB1P20700 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AC017007.4-201ENST00000503353 1352 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AC096656.1-201ENST00000623826 1364 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.36□□□□□ -1.23
LMNB1P20700 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.36□□□□□ -1.23
LMNB1P20700 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 CDY11P-201ENST00000447168 1651 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LMNB1P20700 RNA5SP507-201ENST00000363603 121 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 OR13C3-201ENST00000374781 1108 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 OR6E1P-201ENST00000414424 923 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AL713922.1-201ENST00000416477 747 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 NENFP1-201ENST00000419476 466 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 NME1P1-201ENST00000420914 382 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AL139148.1-201ENST00000427122 680 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.36□□□□□ -1.23
LMNB1P20700 AC092017.2-201ENST00000427600 362 ntBASIC7.36□□□□□ -1.23
LMNB1P20700 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms