Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.32□□□□□ -1.08
CFTRP13569 RNU1-6P-201ENST00000516290 144 ntBASIC8.32□□□□□ -1.08
CFTRP13569 HMGB1P23-201ENST00000518743 568 ntBASIC8.32□□□□□ -1.08
CFTRP13569 OR8Q1P-201ENST00000526467 655 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AC116553.2-201ENST00000564203 463 ntBASIC8.32□□□□□ -1.08
CFTRP13569 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.32□□□□□ -1.08
CFTRP13569 AL049536.1-201ENST00000625043 744 ntBASIC8.32□□□□□ -1.08
CFTRP13569 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CFTRP13569 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.32□□□□□ -1.08
CFTRP13569 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.31□□□□□ -1.08
CFTRP13569 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 SNORA73.1-201ENST00000363107 205 ntBASIC8.31□□□□□ -1.08
CFTRP13569 RN7SKP145-201ENST00000363291 303 ntBASIC8.31□□□□□ -1.08
CFTRP13569 MIR23A-201ENST00000385245 73 ntBASIC8.31□□□□□ -1.08
CFTRP13569 AL050305.1-201ENST00000399993 1230 ntBASIC8.31□□□□□ -1.08
CFTRP13569 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.31□□□□□ -1.08
CFTRP13569 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.31□□□□□ -1.08
CFTRP13569 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.31□□□□□ -1.08
CFTRP13569 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.31□□□□□ -1.08
CFTRP13569 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.31□□□□□ -1.08
CFTRP13569 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.31□□□□□ -1.08
CFTRP13569 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.31□□□□□ -1.08
CFTRP13569 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.31□□□□□ -1.08
CFTRP13569 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.31□□□□□ -1.08
CFTRP13569 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.31□□□□□ -1.08
CFTRP13569 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.31□□□□□ -1.08
CFTRP13569 AL445567.2-201ENST00000618935 498 ntBASIC8.31□□□□□ -1.08
CFTRP13569 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CFTRP13569 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CFTRP13569 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.3□□□□□ -1.08
CFTRP13569 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.3□□□□□ -1.08
CFTRP13569 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.3□□□□□ -1.08
CFTRP13569 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 MIR23B-201ENST00000384832 97 ntBASIC8.3□□□□□ -1.08
CFTRP13569 RPL23AP59-201ENST00000399415 461 ntBASIC8.3□□□□□ -1.08
CFTRP13569 AL035079.1-201ENST00000405210 287 ntBASIC8.3□□□□□ -1.08
CFTRP13569 TRGV7-201ENST00000427089 353 ntBASIC8.3□□□□□ -1.08
CFTRP13569 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC8.3□□□□□ -1.08
CFTRP13569 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.3□□□□□ -1.08
CFTRP13569 TDGF1P1-201ENST00000445734 527 ntBASIC8.3□□□□□ -1.08
CFTRP13569 RPL7P19-201ENST00000469948 618 ntBASIC8.3□□□□□ -1.08
CFTRP13569 NDUFB4P11-201ENST00000560510 395 ntBASIC8.3□□□□□ -1.08
CFTRP13569 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.3□□□□□ -1.08
CFTRP13569 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.3□□□□□ -1.08
CFTRP13569 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC8.3□□□□□ -1.08
CFTRP13569 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CFTRP13569 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CFTRP13569 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.29□□□□□ -1.08
CFTRP13569 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC8.29□□□□□ -1.08
CFTRP13569 TLK1P1-201ENST00000456760 2440 ntBASIC8.29□□□□□ -1.08
CFTRP13569 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CFTRP13569 RNU1-13P-201ENST00000384499 162 ntBASIC8.29□□□□□ -1.08
CFTRP13569 SNORA70C-201ENST00000384538 135 ntBASIC8.29□□□□□ -1.08
CFTRP13569 ATP5F1P2-201ENST00000398143 760 ntBASIC8.29□□□□□ -1.08
CFTRP13569 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.29□□□□□ -1.08
CFTRP13569 CYCSP34-201ENST00000458172 304 ntBASIC8.29□□□□□ -1.08
CFTRP13569 AC034236.1-201ENST00000469891 373 ntBASIC8.29□□□□□ -1.08
CFTRP13569 AC015795.1-201ENST00000513669 327 ntBASIC8.29□□□□□ -1.08
CFTRP13569 MTCO1P35-201ENST00000515270 228 ntBASIC8.29□□□□□ -1.08
CFTRP13569 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.29□□□□□ -1.08
CFTRP13569 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.29□□□□□ -1.08
CFTRP13569 AC069061.3-201ENST00000582254 823 ntBASIC8.29□□□□□ -1.08
CFTRP13569 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 AC090948.1-201ENST00000607464 549 ntBASIC8.29□□□□□ -1.08
CFTRP13569 ZYXP1-201ENST00000617638 118 ntBASIC8.29□□□□□ -1.08
CFTRP13569 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CFTRP13569 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CFTRP13569 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CFTRP13569 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CFTRP13569 AL731566.1-201ENST00000620490 1937 ntBASIC8.28□□□□□ -1.08
CFTRP13569 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.28□□□□□ -1.08
CFTRP13569 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CFTRP13569 AL117339.4-201ENST00000608335 7063 ntBASIC8.28□□□□□ -1.08
CFTRP13569 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
CFTRP13569 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CFTRP13569 AC017079.1-201ENST00000333650 415 ntBASIC8.28□□□□□ -1.08
CFTRP13569 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.28□□□□□ -1.08
CFTRP13569 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.28□□□□□ -1.08
CFTRP13569 BMS1P19-201ENST00000433925 393 ntBASIC8.28□□□□□ -1.08
CFTRP13569 AL359265.1-201ENST00000440296 795 ntBASIC8.28□□□□□ -1.08
CFTRP13569 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CFTRP13569 IGKV3OR22-2-201ENST00000517943 313 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms