Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 RNA5SP435-201ENST00000364044 108 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AC007618.1-201ENST00000366455 732 ntBASIC5.2□□□□□ -1.58
CDH1P12830 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 RNU1-77P-201ENST00000390868 162 ntBASIC5.2□□□□□ -1.58
CDH1P12830 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AL512422.1-201ENST00000407033 553 ntBASIC5.2□□□□□ -1.58
CDH1P12830 PTGES3P2-201ENST00000407942 482 ntBASIC5.2□□□□□ -1.58
CDH1P12830 NPM1P40-201ENST00000412758 733 ntBASIC5.2□□□□□ -1.58
CDH1P12830 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
CDH1P12830 NAP1L4P2-201ENST00000425958 899 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 RPL19P16-201ENST00000433839 588 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 AC016724.1-201ENST00000453215 421 ntBASIC5.2□□□□□ -1.58
CDH1P12830 MTND6P32-201ENST00000457611 483 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 RN7SL101P-201ENST00000496350 279 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AL136038.1-201ENST00000497246 351 ntBASIC5.2□□□□□ -1.58
CDH1P12830 IGBP1P4-201ENST00000503202 879 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 AC010374.2-201ENST00000512933 535 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 HMGN1P9-201ENST00000515212 298 ntBASIC5.2□□□□□ -1.58
CDH1P12830 RNU6-491P-201ENST00000516099 110 ntBASIC5.2□□□□□ -1.58
CDH1P12830 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH1P12830 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH1P12830 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH1P12830 AC244107.2-201ENST00000611773 76 ntBASIC5.2□□□□□ -1.58
CDH1P12830 AC005840.5-201ENST00000619166 599 ntBASIC5.2□□□□□ -1.58
CDH1P12830 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH1P12830 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH1P12830 AC104623.2-202ENST00000623477 4002 ntBASIC5.2□□□□□ -1.58
CDH1P12830 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH1P12830 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH1P12830 AC007342.5-201ENST00000571340 2142 ntBASIC5.2□□□□□ -1.58
CDH1P12830 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 TRIM51GP-201ENST00000534741 1350 ntBASIC5.19□□□□□ -1.58
CDH1P12830 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH1P12830 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH1P12830 RNU6-1331P-201ENST00000363658 106 ntBASIC5.19□□□□□ -1.58
CDH1P12830 RNA5SP335-201ENST00000363817 110 ntBASIC5.19□□□□□ -1.58
CDH1P12830 U3.25-201ENST00000391209 220 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CDH1P12830 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH1P12830 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH1P12830 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH1P12830 CYCSP6-201ENST00000434498 302 ntBASIC5.19□□□□□ -1.58
CDH1P12830 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH1P12830 AL035090.1-201ENST00000454835 332 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC092902.1-201ENST00000486999 259 ntBASIC5.19□□□□□ -1.58
CDH1P12830 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH1P12830 MYL12BP2-201ENST00000503948 512 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC016550.1-201ENST00000505348 785 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC119751.4-201ENST00000507498 357 ntBASIC5.19□□□□□ -1.58
CDH1P12830 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH1P12830 EIF3KP3-201ENST00000514461 639 ntBASIC5.19□□□□□ -1.58
CDH1P12830 MTATP6P9-201ENST00000515039 680 ntBASIC5.19□□□□□ -1.58
CDH1P12830 SEC11B-201ENST00000518383 499 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH1P12830 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH1P12830 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH1P12830 AC005341.1-201ENST00000571086 708 ntBASIC5.19□□□□□ -1.58
CDH1P12830 RN7SL356P-201ENST00000582228 248 ntBASIC5.19□□□□□ -1.58
CDH1P12830 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH1P12830 AC011445.2-201ENST00000599274 173 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms