Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 RPEP1-201ENST00000504507 658 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AC112198.4-201ENST00000515450 351 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 RNU5A-7P-201ENST00000515979 116 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.29□□□□□ -1.56
UBL4AP11441 AP003355.1-201ENST00000518956 587 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.29□□□□□ -1.56
UBL4AP11441 AC127381.1-201ENST00000555979 939 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.29□□□□□ -1.56
UBL4AP11441 MIR4472-2-201ENST00000582069 67 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AC067773.1-201ENST00000603284 1094 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 HIRAP1-201ENST00000605318 787 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AC090525.3-201ENST00000605601 189 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AC021851.1-201ENST00000608537 1082 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 RMST_10.1-201ENST00000616309 154 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.29□□□□□ -1.56
UBL4AP11441 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.29□□□□□ -1.56
UBL4AP11441 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.29□□□□□ -1.56
UBL4AP11441 AC093311.1-201ENST00000506586 2021 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 AC114774.1-201ENST00000507410 1770 ntBASIC5.29□□□□□ -1.56
UBL4AP11441 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBL4AP11441 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 MAPK10-349ENST00000641767 3661 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
UBL4AP11441 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 RN7SKP28-201ENST00000364770 305 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 AL355143.1-201ENST00000407101 841 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 MIR1203-201ENST00000408812 85 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 RN7SKP240-201ENST00000410583 375 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 AL353093.1-201ENST00000441292 436 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 CASP3P1-201ENST00000446037 609 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 RPS23P2-201ENST00000463671 415 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC074255.1-201ENST00000511259 501 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 AC114781.3-201ENST00000512083 142 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 IGKV2D-10-201ENST00000520194 281 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 GLRXP2-201ENST00000555594 321 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC133794.1-201ENST00000602731 914 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 AC023813.4-201ENST00000607580 580 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.28□□□□□ -1.56
UBL4AP11441 AC093875.1-201ENST00000623688 504 ntBASIC5.28□□□□□ -1.56
UBL4AP11441 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBL4AP11441 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
UBL4AP11441 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
UBL4AP11441 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.27□□□□□ -1.57
UBL4AP11441 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBL4AP11441 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
UBL4AP11441 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms