Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.85□□□□□ -1.79
CXCL1P09341 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.85□□□□□ -1.79
CXCL1P09341 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CXCL1P09341 AC114786.1-201ENST00000512892 1415 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 AC092111.2-201ENST00000611627 1414 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 MAPK10-303ENST00000641324 3959 ntBASIC3.85□□□□□ -1.79
CXCL1P09341 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXCL1P09341 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC016588.2-201ENST00000632484 3021 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL1P09341 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL1P09341 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL1P09341 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 AL606537.1-201ENST00000607258 2011 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL1P09341 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 OR10J6P-201ENST00000289731 930 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CXCL1P09341 GSTM3P2-201ENST00000412746 530 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC245060.4-201ENST00000413293 1121 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 SDHDP6-201ENST00000414693 480 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC004552.1-201ENST00000419089 348 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AL034379.1-201ENST00000423216 253 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 RGS17P1-201ENST00000423358 553 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.84□□□□□ -1.79
CXCL1P09341 FGF7P3-201ENST00000454645 303 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 RNU7-157P-201ENST00000459600 66 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC104339.1-201ENST00000465478 348 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 RPS26P3-201ENST00000470205 348 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC090543.2-201ENST00000483963 348 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC004057.1-201ENST00000485827 348 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 RPS6P4-201ENST00000494693 758 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC097173.1-201ENST00000505862 819 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL1P09341 AP004607.2-201ENST00000533949 322 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC078878.1-201ENST00000539832 958 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC079600.1-201ENST00000550326 297 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.84□□□□□ -1.79
CXCL1P09341 NDUFB4P11-201ENST00000560510 395 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL1P09341 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC092121.1-201ENST00000569452 202 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.84□□□□□ -1.79
CXCL1P09341 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.84□□□□□ -1.79
CXCL1P09341 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 AL121873.1-201ENST00000616013 524 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC023509.5-201ENST00000617434 807 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC006840.1-201ENST00000623069 542 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 AC067931.1-201ENST00000624190 671 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC3.84□□□□□ -1.79
CXCL1P09341 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.84□□□□□ -1.79
CXCL1P09341 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CXCL1P09341 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CXCL1P09341 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.84□□□□□ -1.79
CXCL1P09341 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CXCL1P09341 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CXCL1P09341 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CXCL1P09341 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.84□□□□□ -1.8
CXCL1P09341 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CXCL1P09341 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXCL1P09341 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 ATP5F1P2-201ENST00000398143 760 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AL645733.1-201ENST00000402250 217 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 SLC20A1P1-201ENST00000413906 956 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 QRSL1P2-201ENST00000418582 964 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.83□□□□□ -1.8
CXCL1P09341 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AMYP1-201ENST00000440059 1023 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 HMGB3P9-201ENST00000441799 583 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AC004980.3-201ENST00000447046 365 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 AP006222.1-205ENST00000450734 457 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 SCARNA10-201ENST00000459255 330 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.83□□□□□ -1.8
CXCL1P09341 MRPS5P3-201ENST00000515577 166 ntBASIC3.83□□□□□ -1.8
CXCL1P09341 SNORA43.3-201ENST00000517240 103 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms