Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 DDX39BP1-205ENST00000422507 192 ntBASIC5.36□□□□□ -1.55
APOEP02649 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 AC046176.1-201ENST00000435260 1170 ntBASIC5.36□□□□□ -1.55
APOEP02649 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 AC109462.1-201ENST00000491087 368 ntBASIC5.36□□□□□ -1.55
APOEP02649 AC097173.1-201ENST00000505862 819 ntBASIC5.36□□□□□ -1.55
APOEP02649 OR5M14P-201ENST00000506803 618 ntBASIC5.36□□□□□ -1.55
APOEP02649 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.36□□□□□ -1.55
APOEP02649 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.36□□□□□ -1.55
APOEP02649 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.36□□□□□ -1.55
APOEP02649 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 AL390726.5-202ENST00000564800 256 ntBASIC5.36□□□□□ -1.55
APOEP02649 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.36□□□□□ -1.55
APOEP02649 AC011447.4-201ENST00000587562 111 ntBASIC5.36□□□□□ -1.55
APOEP02649 AC006116.3-201ENST00000592968 361 ntBASIC5.36□□□□□ -1.55
APOEP02649 BNIP3P35-201ENST00000604530 490 ntBASIC5.36□□□□□ -1.55
APOEP02649 AC211433.2-201ENST00000608433 387 ntBASIC5.36□□□□□ -1.55
APOEP02649 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
APOEP02649 AC018445.2-201ENST00000622987 260 ntBASIC5.36□□□□□ -1.55
APOEP02649 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.36□□□□□ -1.55
APOEP02649 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.36□□□□□ -1.55
APOEP02649 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.36□□□□□ -1.55
APOEP02649 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 THAP12P5-201ENST00000405864 2275 ntBASIC5.36□□□□□ -1.55
APOEP02649 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
APOEP02649 AL450345.1-202ENST00000605741 3881 ntBASIC5.36□□□□□ -1.55
APOEP02649 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
APOEP02649 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
APOEP02649 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.35□□□□□ -1.55
APOEP02649 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.35□□□□□ -1.55
APOEP02649 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.35□□□□□ -1.55
APOEP02649 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.35□□□□□ -1.55
APOEP02649 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 RNU4-44P-201ENST00000363050 141 ntBASIC5.35□□□□□ -1.55
APOEP02649 RNU1-106P-201ENST00000384382 164 ntBASIC5.35□□□□□ -1.55
APOEP02649 SNORA70-201ENST00000384436 135 ntBASIC5.35□□□□□ -1.55
APOEP02649 RPL23AP27-201ENST00000415161 451 ntBASIC5.35□□□□□ -1.55
APOEP02649 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
APOEP02649 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.35□□□□□ -1.55
APOEP02649 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.35□□□□□ -1.55
APOEP02649 AC108161.1-201ENST00000461060 402 ntBASIC5.35□□□□□ -1.55
APOEP02649 RN7SKP66-201ENST00000516681 231 ntBASIC5.35□□□□□ -1.55
APOEP02649 AC027308.1-201ENST00000517993 110 ntBASIC5.35□□□□□ -1.55
APOEP02649 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.35□□□□□ -1.55
APOEP02649 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
APOEP02649 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.35□□□□□ -1.55
APOEP02649 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.35□□□□□ -1.55
APOEP02649 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.35□□□□□ -1.55
APOEP02649 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 AC233702.9-201ENST00000581528 203 ntBASIC5.35□□□□□ -1.55
APOEP02649 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.35□□□□□ -1.55
APOEP02649 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
APOEP02649 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
APOEP02649 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOEP02649 TTC39DP-201ENST00000416781 1688 ntBASIC5.34□□□□□ -1.55
APOEP02649 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.55
APOEP02649 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.34□□□□□ -1.55
APOEP02649 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 RN7SKP113-201ENST00000363891 295 ntBASIC5.34□□□□□ -1.55
APOEP02649 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
APOEP02649 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.34□□□□□ -1.55
APOEP02649 BMS1P13-201ENST00000417301 885 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.34□□□□□ -1.55
APOEP02649 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.34□□□□□ -1.55
APOEP02649 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.34□□□□□ -1.55
APOEP02649 BX842559.2-201ENST00000451418 605 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC092647.2-201ENST00000452998 253 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
APOEP02649 AP000942.1-201ENST00000463969 747 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC097484.1-201ENST00000471148 389 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC020779.1-201ENST00000478757 796 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC091544.1-201ENST00000484702 348 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.34□□□□□ -1.55
APOEP02649 NIFKP7-201ENST00000503365 834 ntBASIC5.34□□□□□ -1.55
APOEP02649 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.34□□□□□ -1.55
APOEP02649 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.34□□□□□ -1.55
APOEP02649 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.34□□□□□ -1.55
APOEP02649 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.34□□□□□ -1.55
APOEP02649 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.34□□□□□ -1.55
APOEP02649 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.34□□□□□ -1.55
APOEP02649 AC044860.2-201ENST00000561005 179 ntBASIC5.34□□□□□ -1.55
APOEP02649 MIR3936-201ENST00000584304 110 ntBASIC5.34□□□□□ -1.55
APOEP02649 MIR6719-201ENST00000622428 87 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms