Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL512427.1-201ENST00000618593 349 ntBASIC4.98□□□□□ -1.61
ZIC3O60481 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.98□□□□□ -1.61
ZIC3O60481 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.98□□□□□ -1.61
ZIC3O60481 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.98□□□□□ -1.61
ZIC3O60481 AP001153.1-201ENST00000641024 338 ntBASIC4.98□□□□□ -1.61
ZIC3O60481 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ZIC3O60481 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZIC3O60481 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.98□□□□□ -1.61
ZIC3O60481 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.98□□□□□ -1.61
ZIC3O60481 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
ZIC3O60481 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZIC3O60481 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZIC3O60481 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZIC3O60481 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZIC3O60481 SPATA2P1-201ENST00000431223 2055 ntBASIC4.98□□□□□ -1.61
ZIC3O60481 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC093297.3-201ENST00000607056 2517 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC004076.2-201ENST00000620532 3323 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC123769.1-201ENST00000530992 3192 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
ZIC3O60481 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC009804.1-201ENST00000400949 179 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC096533.1-201ENST00000411645 353 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC093716.1-201ENST00000435923 377 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC105399.1-202ENST00000447303 205 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 RPS3AP53-201ENST00000454716 778 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 RPL7P45-201ENST00000455851 743 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC018638.3-201ENST00000461273 132 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC090058.1-201ENST00000498788 435 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 BTG4P1-201ENST00000510421 183 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 RN7SKP99-201ENST00000517028 307 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 OR7E13P-201ENST00000526052 910 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC118942.1-201ENST00000529674 1035 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 MIR4489-201ENST00000578869 62 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 SNX6P1-201ENST00000601728 1224 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC125494.2-201ENST00000602431 657 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC009237.13-201ENST00000603193 276 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 RNU6-1192P-201ENST00000612197 107 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 RNU6-489P-201ENST00000618289 107 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 AC109809.1-201ENST00000619665 545 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.97□□□□□ -1.61
ZIC3O60481 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.97□□□□□ -1.61
ZIC3O60481 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZIC3O60481 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.97□□□□□ -1.61
ZIC3O60481 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZIC3O60481 MFSD8-213ENST00000641134 1327 ntBASIC4.97□□□□□ -1.61
ZIC3O60481 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.96□□□□□ -1.61
ZIC3O60481 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ZIC3O60481 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ZIC3O60481 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
ZIC3O60481 AC006206.1-201ENST00000544842 3387 ntBASIC4.96□□□□□ -1.61
ZIC3O60481 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.61
ZIC3O60481 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ZIC3O60481 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ZIC3O60481 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.96□□□□□ -1.62
ZIC3O60481 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms