Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 AC026523.2-201ENST00000625039 7739 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.73□□□□□ -1.65
UPK1AO00322 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 TRAV35-201ENST00000390462 330 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 CKS1BP6-201ENST00000424932 240 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 KNOP1P3-201ENST00000446933 426 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 GYG1P1-201ENST00000460864 698 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC097484.1-201ENST00000471148 389 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 RN7SL222P-201ENST00000476452 299 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.73□□□□□ -1.65
UPK1AO00322 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 HIGD1AP14-201ENST00000507617 282 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 AL139041.1-201ENST00000605480 610 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.73□□□□□ -1.65
UPK1AO00322 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
UPK1AO00322 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 ZNF733P-202ENST00000444809 1573 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UPK1AO00322 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UPK1AO00322 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UPK1AO00322 SNORA51.1-201ENST00000363243 140 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 U3.36-201ENST00000408418 213 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 SNORA77-201ENST00000408716 125 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 FABP7P2-201ENST00000429946 379 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 FTLP19-201ENST00000433300 394 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 TXNP5-201ENST00000441043 315 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 RPS17P2-201ENST00000461663 408 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 EIF4A2P5-201ENST00000529914 499 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.72□□□□□ -1.65
UPK1AO00322 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.72□□□□□ -1.65
UPK1AO00322 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 DPRXP4-201ENST00000578053 568 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 AC233702.9-201ENST00000581528 203 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 AC011447.4-201ENST00000587562 111 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.72□□□□□ -1.65
UPK1AO00322 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.72□□□□□ -1.65
UPK1AO00322 SUMO2P15-201ENST00000604285 278 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.72□□□□□ -1.65
UPK1AO00322 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.72□□□□□ -1.65
UPK1AO00322 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 DHX9P1-201ENST00000436565 3076 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPK1AO00322 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.72□□□□□ -1.65
UPK1AO00322 AC068446.1-201ENST00000556425 1549 ntBASIC4.72□□□□□ -1.65
UPK1AO00322 SCARNA15-201ENST00000607520 4325 ntBASIC4.71□□□□□ -1.65
UPK1AO00322 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
UPK1AO00322 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1AO00322 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
UPK1AO00322 RN7SKP269-201ENST00000365545 319 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC002524.1-201ENST00000411687 547 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 DDX39BP1-205ENST00000422507 192 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC005033.1-201ENST00000428904 813 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 RPS29P9-201ENST00000440360 171 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AL450023.3-201ENST00000440592 271 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1AO00322 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1AO00322 AURKAPS1-201ENST00000451805 1212 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 RPL5P22-201ENST00000480199 884 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1AO00322 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1AO00322 SUMO2P4-201ENST00000504193 276 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC010350.1-201ENST00000504908 231 ntBASIC4.71□□□□□ -1.66
UPK1AO00322 AC073358.1-201ENST00000505671 684 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms