Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPS27AP18-201ENST00000515536 459 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 RNU6-615P-201ENST00000516065 106 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 EIF1AXP2-201ENST00000555940 413 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC020978.7-201ENST00000575953 1187 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 MTCO1P1-201ENST00000624263 1081 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 SNORA17.5-201ENST00000630429 132 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC027279.1-201ENST00000568885 4284 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC091046.3-201ENST00000631455 1574 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AC007342.9-201ENST00000623877 1385 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 Z95331.1-201ENST00000623075 23112 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 CUL4AP1-201ENST00000514750 1863 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 TMSB4XP4-201ENST00000323496 618 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 RNA5SP46-201ENST00000362370 120 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDLIM1O00151 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM1O00151 HMGB1P32-201ENST00000425971 565 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AC090018.1-201ENST00000434369 367 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AC006335.2-201ENST00000437993 330 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AP000281.1-201ENST00000444036 316 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM1O00151 RNU6-775P-201ENST00000459318 96 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.03□□□□□ -1.6
PDLIM1O00151 STMN1P2-201ENST00000508435 439 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 PDCD5P1-201ENST00000543528 309 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 IGBP1P1-201ENST00000554337 1009 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AL049874.4-201ENST00000557593 255 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC126175.1-201ENST00000617041 758 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 MIR6839-201ENST00000620425 113 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 AC068254.2-201ENST00000623938 3577 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 LINC01963-201ENST00000562038 3148 ntBASIC5.03□□□□□ -1.6
PDLIM1O00151 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM1O00151 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PDLIM1O00151 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM1O00151 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 OR9G4-201ENST00000302957 984 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 RNA5SP132-201ENST00000364725 118 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 RNA5SP131-201ENST00000365452 119 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDLIM1O00151 RNA5SP122-201ENST00000384457 108 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 MIR137-201ENST00000385223 102 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 AL596448.1-201ENST00000415024 392 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 AC096644.3-201ENST00000416788 338 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 EIF4EP1-201ENST00000422311 642 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AL662874.1-201ENST00000426065 230 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AC002504.1-201ENST00000438281 691 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms