Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL133388.1-201ENST00000404509 287 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 RPL36AP10-201ENST00000421785 322 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 AL389925.1-201ENST00000432257 728 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AL356981.1-201ENST00000454879 684 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 RN7SL72P-201ENST00000460697 269 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 GYG1P1-201ENST00000460864 698 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC188H7C350 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC109481.1-201ENST00000509173 282 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC188H7C350 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC027308.1-201ENST00000517993 110 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC188H7C350 EIF4A2P5-201ENST00000529914 499 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC188H7C350 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC090888.3-201ENST00000558917 509 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 BNIP3P35-201ENST00000604530 490 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 MIR6778-201ENST00000617912 73 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 AC073593.1-201ENST00000624500 411 ntBASIC5.39□□□□□ -1.55
CCDC188H7C350 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC188H7C350 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC188H7C350 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC188H7C350 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC188H7C350 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 OR13C1P-202ENST00000641378 2919 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC188H7C350 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC188H7C350 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC188H7C350 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC188H7C350 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 RPS11P7-201ENST00000442125 465 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 EEF1B2P6-201ENST00000445713 673 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 VN1R48P-201ENST00000448149 1036 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC069277.2-201ENST00000454211 432 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC188H7C350 EIF2S2P4-201ENST00000461070 984 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC025181.1-201ENST00000477507 416 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 LARP7P4-201ENST00000481075 878 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 RN7SL441P-201ENST00000492388 296 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC188H7C350 RNU6-491P-201ENST00000516099 110 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC027026.1-201ENST00000532323 742 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 SNRPGP1-201ENST00000553864 222 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC019131.2-201ENST00000609071 870 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 CU639417.4-201ENST00000623928 207 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC073592.6-201ENST00000624271 415 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
CCDC188H7C350 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC188H7C350 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC188H7C350 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CCDC188H7C350 AC093849.1-201ENST00000563631 2209 ntBASIC5.38□□□□□ -1.55
CCDC188H7C350 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 MRRFP1-201ENST00000435941 1675 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CCDC188H7C350 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms