Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RNU6-451P-201ENST00000362921 107 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RNA5SP429-201ENST00000363688 109 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SKP225-201ENST00000410405 352 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RPL34P19-201ENST00000415903 342 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 VDAC1P10-201ENST00000416715 891 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 VDAC1P2-201ENST00000423609 850 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 EIF1P3-201ENST00000423841 334 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL445669.1-201ENST00000426743 755 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC133104.1-201ENST00000429100 218 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 GTF2IP20-201ENST00000431663 360 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC092809.1-201ENST00000441469 474 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 SS18L2P1-201ENST00000445923 213 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC233279.1-201ENST00000455300 423 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 MEMO1P3-201ENST00000459811 302 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC015724.1-201ENST00000478577 156 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 MTND1P3-201ENST00000484956 952 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RPL36AP51-201ENST00000487216 318 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SL776P-201ENST00000493390 268 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 IGBP1P4-201ENST00000503202 879 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 TPM3P3-201ENST00000521343 354 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC087257.2-201ENST00000538759 928 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC011611.1-201ENST00000552179 197 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC093519.1-201ENST00000566109 298 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC007151.1-201ENST00000572774 483 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL355375.2-201ENST00000574825 175 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 MIR544B-201ENST00000582372 78 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC018926.3-201ENST00000618841 406 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 SNORA43.5-201ENST00000631270 138 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC073488.7-201ENST00000633785 778 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC183089.2-201ENST00000637931 916 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 AL023806.3-201ENST00000638502 2704 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL078621.1-201ENST00000272567 768 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OR52B1P-201ENST00000316506 909 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 RNA5SP260-201ENST00000363849 111 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 RNU6-1322P-201ENST00000364309 107 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SSX6-201ENST00000376932 562 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 MIR506-201ENST00000384998 124 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SNORD115.1-201ENST00000391109 76 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC104297.1-201ENST00000393779 870 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC211486.3-201ENST00000412694 621 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms